RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PANK4Q9NVE7 773 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 DZANK1Q9NVP4 752 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 SEL1LQ9UBV2 794 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 PROZP22891 400 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 IGFBP6P24592 240 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 STK4Q13043 487 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 STIM1Q13586 685 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ERCC6LQ2NKX8 1250 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 HERC4Q5GLZ8 1057 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 GLRA4Q5JXX5 417 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 CES5AQ6NT32 575 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ZBTB45Q96K62 511 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 FBXL18Q96ME1 805 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 PPP1R10Q96QC0 940 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 RXFP1Q9HBX9 757 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 C2orf16Q68DN1 1984 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 DENND4AQ7Z401 1863 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 MFAP3LO75121 409 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 TADA2AO75478 443 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 GRM5P41594 1212 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 PRCPP42785 496 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ADKP55263 362 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 OSTNP61366 133 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 GNG11P61952 73 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 PAK1Q13153 545 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 USP41Q3LFD5 358 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ARHGAP29Q52LW3 1261 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 RTP2Q5QGT7 225 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 KIAA1841Q6NSI8 718 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 FOXR2Q6PJQ5 311 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 ALKAL1Q6UXT8 129 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 TOGARAM2Q6ZUX3 1019 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 SMYD4Q8IYR2 804 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 KIAA0895Q8NCT3 520 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 OLFML3Q9NRN5 406 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM1-212ENST00000558347 SSX2IPQ9Y2D8 614 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 V9GYY5 206 aaPredicted RBP11.14□□□□□ -0.63
TPM1-212ENST00000558347 VWA8A3KMH1 1905 aa11.14□□□□□ -0.63
TPM1-212ENST00000558347 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 FAM13AO94988 1023 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 ADH1AP07327 375 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 MYBP10242 640 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 MCF2P10911 925 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 MTHFRP42898 656 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 CLCNKBP51801 687 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 SMTNP53814 917 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 SOX4Q06945 474 aaPredicted RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 GOLGA8FQ08AF8 430 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 GOLGA8DPQ0D2H9 430 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 MPZL3Q6UWV2 235 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 CD300LGQ6UXG3 332 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 GLYCTKQ8IVS8 523 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 RIN2Q8WYP3 895 aaPredicted RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 RIPOR3Q96MK2 946 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 ZMAT2Q96NC0 199 aaKnown RBP11.13□□□□□ -0.63
TPM1-212ENST00000558347 NECTIN4Q96NY8 510 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 PARVGQ9HBI0 331 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 CTNND2Q9UQB3 1225 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 ADGRG1Q9Y653 693 aa11.13□□□□□ -0.63
TPM1-212ENST00000558347 SF3B1O75533 1304 aaKnown RBP eCLIP11.13□□□□□ -0.639e-6■■■■■ 68.9
TPM1-212ENST00000558347 WDFY4Q6ZS81 3184 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SMIM28A0A1B0GU29 152 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 PSMA7O14818 248 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 TEX33O43247 280 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 TOM1L1O75674 476 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 ZRANB2O95218 330 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM1-212ENST00000558347 GLUD1P00367 558 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 CLCN6P51797 869 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 YARSP54577 528 aaKnown RBP11.12□□□□□ -0.63
TPM1-212ENST00000558347 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 STRN3Q13033 797 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 SEZ6Q53EL9 994 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
TPM1-212ENST00000558347 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms