RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 NOTUMQ6P988 496 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 TLDC1Q6P9B6 456 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 SHC4Q6S5L8 630 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 C6orf89Q6UWU4 347 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 TRMT1LQ7Z2T5 733 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 MRPL10Q7Z7H8 261 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 CEP57Q86XR8 500 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 FAM114A1Q8IWE2 563 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 ZBTB8OSQ8IWT0 167 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 FUKQ8N0W3 1084 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 RNF10Q8N5U6 811 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 NOA1Q8NC60 698 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 CCDC26Q8TAB7 109 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 MIPOL1Q8TD10 442 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 EPSTI1Q96J88 318 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 IFT74Q96LB3 600 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 ATP6V1G3Q96LB4 118 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 CCT8L2Q96SF2 557 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 DNAJC7Q99615 494 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 NSRP1Q9H0G5 558 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 STMN4Q9H169 189 aaPredicted RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 MINDY3Q9H8M7 445 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 OLFML3Q9NRN5 406 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 LARSQ9P2J5 1176 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 RWDD2AQ9UIY3 292 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 MAN1B1Q9UKM7 699 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 HYOU1Q9Y4L1 999 aa8.6□□□□□ -1.03
RTF1-205ENST00000558298 TDRD15B5MCY1 1934 aaKnown RBP8.6□□□□□ -1.03
RTF1-205ENST00000558298 A0A1W2PQJ5 194 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 DENND3A2RUS2 1198 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 GMNCA6NCL1 334 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 C5orf60A6NFR6 353 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 AGPSO00116 658 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 PDLIM1O00151 329 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 N4BP3O15049 544 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 HIP1RO75146 1068 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 PIGRP01833 764 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 MYZAPP0CAP1 466 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 FERP16591 822 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 ATF7P17544 494 aaPredicted RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 NPTX2P47972 431 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 NCKAP1LP55160 1127 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 EIF3BP55884 814 aaKnown RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 DYNC1I2Q13409 638 aaKnown RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 CUL1Q13616 776 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 ALCAMQ13740 583 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 MAPK6Q16659 721 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 AGBL2Q5U5Z8 902 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 RRAGBQ5VZM2 374 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 CAPRIN2Q6IMN6 1127 aaKnown RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 ZPBP2Q6X784 338 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 USP49Q70CQ1 688 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
RTF1-205ENST00000558298 ECHDC2Q86YB7 292 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 KSR1Q8IVT5 923 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 MYOCDQ8IZQ8 938 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 MYCBPAPQ8TBZ2 947 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 RNF217Q8TC41 542 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 ZNF483Q8TF39 744 aaPredicted RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 ZFAND2BQ8WV99 257 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 HVCN1Q96D96 273 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 SCLT1Q96NL6 688 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 CLIC6Q96NY7 704 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 FIZ1Q96SL8 496 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 ADAM2Q99965 735 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 LRRC27Q9C0I9 530 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 PARVGQ9HBI0 331 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 UBN1Q9NPG3 1134 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 GPRC5CQ9NQ84 441 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 FAM105AQ9NUU6 356 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 GINS2Q9Y248 185 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.59□□□□□ -1.03
RTF1-205ENST00000558298 MTCH2Q9Y6C9 303 aa8.59□□□□□ -1.03
RTF1-205ENST00000558298 A0A087X0B3 334 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 RFXAPO00287 272 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 GYPCP04921 128 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 RB1P06400 928 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PRR29P0C7W0 189 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 IDEP14735 1019 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 GAP43P17677 238 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 PROZP22891 400 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 CCND1P24385 295 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 STAT6P42226 847 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 TNNC1P63316 161 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 POU5F1Q01860 360 aaKnown RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 EHHADHQ08426 723 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 GIT2Q14161 759 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 ZRSR2Q15696 482 aaKnown RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 PPP2R5EQ16537 467 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 MEA1Q16626 185 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 ANKRD20A8PQ5CZ79 823 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 UBXN11Q5T124 520 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 FAM102BQ5T8I3 360 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 C8orf74Q6P047 294 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 CATSPER4Q7RTX7 472 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms