RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 NRG4Q8WWG1 115 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 STMN2Q93045 179 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 LENG1Q96BZ8 264 aaPredicted RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 P2RX7Q99572 595 aaKnown RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 ANO3Q9BYT9 981 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 ANGPTL2Q9UKU9 493 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 MRPL11Q9Y3B7 192 aaKnown RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 CDH16O75309 829 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 PIM1P11309 404 aaPredicted RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 KRT13P13646 458 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 UCHL3P15374 230 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 HOXA13P31271 388 aaPredicted RBP11.54□□□□□ -0.56
USP3-206ENST00000558157 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 HS2ST1Q7LGA3 356 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 ERVK-5Q9HDB9 667 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 WHRNQ9P202 907 aa11.54□□□□□ -0.56
USP3-206ENST00000558157 FAM47DPA6NHR8 397 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
USP3-206ENST00000558157 C2CD2LO14523 706 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 CCNT1O60563 726 aaKnown RBP11.53□□□□□ -0.56
USP3-206ENST00000558157 HADHBP55084 474 aaKnown RBP11.53□□□□□ -0.56
USP3-206ENST00000558157 INHBCP55103 352 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 FKBP1BP68106 108 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 AP3B2Q13367 1082 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 PRPF4BQ13523 1007 aaKnown RBP11.53□□□□□ -0.56
USP3-206ENST00000558157 MPP2Q14168 576 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 COG2Q14746 738 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 OTUD6AQ7L8S5 288 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 ARHGAP24Q8N264 748 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 C2orf69Q8N8R5 385 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 ZNF653Q96CK0 615 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 CATSPER2Q96P56 530 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 BTBD10Q9BSF8 475 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
USP3-206ENST00000558157 BLOC1S4Q9NUP1 217 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 PHTF1Q9UMS5 762 aa11.53□□□□□ -0.56
USP3-206ENST00000558157 EDIL3O43854 480 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.56
USP3-206ENST00000558157 CFBP00751 764 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 GH1P01241 217 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 SESN3P58005 492 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 USP46P62068 366 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 CAV1Q03135 178 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 ALDH16A1Q8IZ83 802 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 UBL4BQ8N7F7 174 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 C10orf82Q8WW14 230 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.56
USP3-206ENST00000558157 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.56
USP3-206ENST00000558157 SLX1AQ9BQ83 275 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 HOMER2Q9NSB8 354 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 ZFP69BQ9UJL9 534 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 ITGB1BP2Q9UKP3 347 aa11.52□□□□□ -0.56
USP3-206ENST00000558157 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 UNCXA6NJT0 531 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 F8W8V4 182 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 PIK3CDO00329 1044 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 NFIBO00712 420 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 TBX10O75333 385 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 TDP2O95551 362 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 ECEL1O95672 775 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 TTC4O95801 387 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 ITGA2BP08514 1039 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 FDX1P10109 184 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 IDO1P14902 403 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 FOXN2P32314 431 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 RGS2P41220 211 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 GALCP54803 685 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 KCNH2Q12809 1159 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 GRB10Q13322 594 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 DPY19L2P1Q6NXN4 242 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 CCDC137Q6PK04 289 aaKnown RBP11.52□□□□□ -0.57
USP3-206ENST00000558157 PRELID2Q8N945 189 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 PIP4K2CQ8TBX8 421 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 NAT14Q8WUY8 206 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 SLCO2A1Q92959 643 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 C18orf8Q96DM3 657 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 CDK5RAP3Q96JB5 506 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 CCDC77Q9BR77 488 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 RAB34Q9BZG1 259 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 PTTG2Q9NZH5 202 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 ADAMTS5Q9UNA0 930 aa11.52□□□□□ -0.57
USP3-206ENST00000558157 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
USP3-206ENST00000558157 ASMTLO95671 621 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 POLR2MP0CAP2 368 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 CREB1P16220 341 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
USP3-206ENST00000558157 JAM2P57087 298 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 RTP1P59025 263 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 DSG1Q02413 1049 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
USP3-206ENST00000558157 ACSBG2Q5FVE4 666 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms