RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CAMKK1Q8N5S9 505 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 APPL2Q8NEU8 664 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 HAS1Q92839 578 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ZC3H10Q96K80 434 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 HSD17B14Q9BPX1 270 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 EIF2AK1Q9BQI3 630 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 LARP6Q9BRS8 491 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 PDZD7Q9H5P4 517 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 SLITRK6Q9H5Y7 841 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ASAH2Q9NR71 780 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 RXFP3Q9NSD7 469 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 AFF4Q9UHB7 1163 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 PCDHA12Q9UN75 941 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 SLC8A2Q9UPR5 921 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 GDAQ9Y2T3 454 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 INSL5Q9Y5Q6 135 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 PDCD11Q14690 1871 aaKnown RBP5.7□□□□□ -1.5
SPG11-208ENST00000558155 ATRXP46100 2492 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 ATG2BQ96BY7 2078 aa5.7□□□□□ -1.5
SPG11-208ENST00000558155 NID2Q14112 1375 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 SMIM28A0A1B0GU29 152 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 SRRM3A6NNA2 597 aaPredicted RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 SLC38A8A6NNN8 435 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 C4orf47A7E2U8 309 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 I3L4J1 428 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 ARNTLO00327 626 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 NRG2O14511 850 aaPredicted RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 MOSPD3O75425 235 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 SEC24AO95486 1093 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CAVIN2O95810 425 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 PRKCBP05771 671 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CEACAM1P13688 526 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CPA1P15085 419 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 GJA1P17302 382 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 LIG1P18858 919 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 ATP2B1P20020 1258 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CTHP32929 405 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 RPL9P32969 192 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 RDXP35241 583 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 MPLP40238 635 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 SOX9P48436 509 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 RARRES1P49788 294 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 EPHB3P54753 998 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 EPHA5P54756 1037 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 EVCP57679 992 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 PLCB2Q00722 1185 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 AMPD2Q01433 879 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 FCHO2Q0JRZ9 810 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 TWF1Q12792 350 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 GRSF1Q12849 480 aaKnown RBP eCLIP5.69□□□□□ -1.5
SPG11-208ENST00000558155 PLD1Q13393 1074 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 MRPL58Q14197 206 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 PON2Q15165 354 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 ELF2Q15723 593 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 DCAF4L1Q3SXM0 396 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CTXN3Q4LDR2 81 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CD300LGQ6UXG3 332 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 Q6ZS52 159 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 ARID3BQ8IVW6 561 aaPredicted RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 MCPH1Q8NEM0 835 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 TTC8Q8TAM2 541 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 DEPTORQ8TB45 409 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 PIGOQ8TEQ8 1089 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 KCNB2Q92953 911 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 EXOC4Q96A65 974 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 JAKMIP1Q96N16 626 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 PPP1R10Q96QC0 940 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 NACC1Q96RE7 527 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 TMEM209Q96SK2 561 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 AGXT2Q9BYV1 514 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CXCL16Q9H2A7 254 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 NCOA5Q9HCD5 579 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 SLC38A7Q9NVC3 462 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 THG1LQ9NWX6 298 aaKnown RBP5.69□□□□□ -1.5
SPG11-208ENST00000558155 OBP2AQ9NY56 170 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CEP72Q9P209 647 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 FBXL5Q9UKA1 691 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 NUB1Q9Y5A7 615 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 DMXL1Q9Y485 3027 aa5.69□□□□□ -1.5
SPG11-208ENST00000558155 CHD8Q9HCK8 2581 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 A0A087WWV3 80 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PODXLO00592 558 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 GIPC1O14908 333 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 KHNYNO15037 678 aaKnown RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 EXTL3O43909 919 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 USO1O60763 962 aaKnown RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 FGF19O95750 216 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 CSRP1P21291 193 aaKnown RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 RPS6KB1P23443 525 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 IGFBP6P24592 240 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 ALDH1A3P47895 512 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PXNP49023 591 aaPredicted RBP5.68□□□□□ -1.5
SPG11-208ENST00000558155 EFNA5P52803 228 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 CREB5Q02930 508 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 RING1Q06587 406 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 ZNF252P-AS1Q0IIN9 211 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 CCINQ13939 588 aa5.68□□□□□ -1.5
SPG11-208ENST00000558155 PPP2R5AQ15172 486 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms