RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
RTF1-204ENST00000558117 VPS33BQ9H267 617 aa7.48□□□□□ -1.21
RTF1-204ENST00000558117 CD248Q9HCU0 757 aa7.48□□□□□ -1.21
RTF1-204ENST00000558117 ASTN2O75129 1339 aaPredicted RBP7.48□□□□□ -1.21
RTF1-204ENST00000558117 FLT4P35916 1363 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 A0A1W2PRX2 142 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 PMS2P1A4D2B8 440 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 MUSKO15146 869 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 NRP2O60462 931 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 GJB1P08034 283 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 COMTP21964 271 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 GPR3P46089 330 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 CD69Q07108 199 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 PPARAQ07869 468 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 CRHR2Q13324 411 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 RIN1Q13671 783 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 FSCN1Q16658 493 aaKnown RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 CNTD1Q8N815 330 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 ANKRD53Q8N9V6 530 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 USP38Q8NB14 1042 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 PLA2G15Q8NCC3 412 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 PPP1R14CQ8TAE6 165 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 Q8TCH9 128 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 UHRF1Q96T88 793 aaPredicted RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 FDXACB1Q9BRP7 624 aaPredicted RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 WNT8AQ9H1J5 351 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 KCTD10Q9H3F6 313 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 GGA3Q9NZ52 723 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 EVLQ9UI08 416 aaPredicted RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 ZMYND8Q9ULU4 1186 aaPredicted RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 SLC30A1Q9Y6M5 507 aa7.47□□□□□ -1.21
RTF1-204ENST00000558117 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
RTF1-204ENST00000558117 ZFHX4Q86UP3 3567 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 ENPP1P22413 925 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 GUCY2FP51841 1108 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 LGALS4P56470 323 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 INHBEP58166 350 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 FAPQ12884 760 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 CLEC14AQ86T13 490 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 NBPF5PQ86XG9 351 aaPredicted RBP7.46□□□□□ -1.22
RTF1-204ENST00000558117 PALM2Q8IXS6 379 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 RPL10LQ96L21 214 aaKnown RBP7.46□□□□□ -1.22
RTF1-204ENST00000558117 ACAP3Q96P50 834 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 C1QTNF3Q9BXJ4 246 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 OSBPL6Q9BZF3 934 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 CFAP54Q96N23 3096 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 WASHC2AQ641Q2 1341 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.22
RTF1-204ENST00000558117 YDJCA8MPS7 323 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 SEC24DO94855 1032 aaPredicted RBP7.45□□□□□ -1.22
RTF1-204ENST00000558117 CAMTA2O94983 1202 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 GPR15P49685 360 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 ADCY7P51828 1080 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 NRG3P56975 720 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 HHEXQ03014 270 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 GRM7Q14831 915 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTF1-204ENST00000558117 CRY2Q49AN0 593 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 GAGE13Q4V321 117 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 NECAB2Q7Z6G3 386 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 PIK3C3Q8NEB9 887 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 FAM89AQ96GI7 184 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 TMEM176AQ96HP8 235 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 PUS7LQ9H0K6 701 aaKnown RBP7.45□□□□□ -1.22
RTF1-204ENST00000558117 QRSL1Q9H0R6 528 aaKnown RBP7.45□□□□□ -1.22
RTF1-204ENST00000558117 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
RTF1-204ENST00000558117 AGO3Q9H9G7 860 aaKnown RBP7.45□□□□□ -1.22
RTF1-204ENST00000558117 TERF2IPQ9NYB0 399 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 RCAN3Q9UKA8 241 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 ATRXP46100 2492 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 SSC5DA1L4H1 1573 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
RTF1-204ENST00000558117 SCN7AQ01118 1682 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 ZNF646O15015 1829 aaPredicted RBP7.44□□□□□ -1.22
RTF1-204ENST00000558117 MANSC4A6NHS7 340 aaPredicted RBP7.44□□□□□ -1.22
RTF1-204ENST00000558117 K7ESF4 209 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 KATNA1O75449 491 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 TOX4O94842 621 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 LY86O95711 162 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 VSIG10L2P0DP72 767 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 GAAP10253 952 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 FOSL2P15408 326 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 MSX2P35548 267 aaPredicted RBP7.44□□□□□ -1.22
RTF1-204ENST00000558117 ADAM8P78325 824 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 DUSP8Q13202 625 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 MTMR1Q13613 665 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 DBX2Q6ZNG2 339 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 GPR135Q8IZ08 494 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 OR14C36Q8NHC7 312 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 RSAD2Q8WXG1 361 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 ADOQ96SZ5 270 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 RTFDC1Q9BY42 306 aaPredicted RBP7.44□□□□□ -1.22
RTF1-204ENST00000558117 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 PLA2G3Q9NZ20 509 aa7.44□□□□□ -1.22
RTF1-204ENST00000558117 NCDNQ9UBB6 729 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms