RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 C14orf119Q9NWQ9 140 aa3.71□□□□□ -1.82
VPS13C-205ENST00000558088 FLRT1Q9NZU1 646 aa3.71□□□□□ -1.82
VPS13C-205ENST00000558088 NR2E3Q9Y5X4 410 aa3.71□□□□□ -1.82
VPS13C-205ENST00000558088 CCDC195A0A1B0GUA6 201 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 WIPF3A6NGB9 483 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 LINC01548A6NM66 108 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 ADM5C9JUS6 153 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 AGFG2O95081 481 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 AMY1AP04745 511 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 OSMP13725 252 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 HOXB6P17509 224 aaKnown RBP3.7□□□□□ -1.82
VPS13C-205ENST00000558088 ITPKBP27987 946 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 CTXN1P60606 82 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 DYRK1AQ13627 763 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 TXNRD1Q16881 649 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 CD300EQ496F6 205 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-205ENST00000558088 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-205ENST00000558088 TSHZ1Q6ZSZ6 1077 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 MIGA2Q7L4E1 593 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 RNF180Q86T96 592 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 JAZF1Q86VZ6 243 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 RASAL3Q86YV0 1011 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 AMOTL1Q8IY63 956 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 ZGPATQ8N5A5 531 aaKnown RBP3.7□□□□□ -1.82
VPS13C-205ENST00000558088 VGLL2Q8N8G2 317 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 MYCBPAPQ8TBZ2 947 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 TLR10Q9BXR5 811 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 SEMA4CQ9C0C4 833 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 CAAP1Q9H8G2 361 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 CCM2LQ9NUG4 571 aaPredicted RBP3.7□□□□□ -1.82
VPS13C-205ENST00000558088 ST3GAL5Q9UNP4 418 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 WASHC2AQ641Q2 1341 aa3.7□□□□□ -1.82
VPS13C-205ENST00000558088 GATA3P23771 443 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 TUBA4AP68366 448 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 TMPRSS15P98073 1019 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 ATP8B2P98198 1209 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 EIF2B5Q13144 721 aaKnown RBP3.69□□□□□ -1.82
VPS13C-205ENST00000558088 HLXQ14774 488 aaPredicted RBP3.69□□□□□ -1.82
VPS13C-205ENST00000558088 PABPC1LQ4VXU2 614 aaKnown RBP3.69□□□□□ -1.82
VPS13C-205ENST00000558088 PLAC9Q5JTB6 97 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 UTP14CQ5TAP6 766 aaKnown RBP3.69□□□□□ -1.82
VPS13C-205ENST00000558088 ADGRG5Q8IZF4 528 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 UBR7Q8N806 425 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 SEMA6DQ8NFY4 1073 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 CHAC2Q8WUX2 184 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 FCRL4Q96PJ5 515 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 TDP1Q9NUW8 608 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 GPR45Q9Y5Y3 372 aa3.69□□□□□ -1.82
VPS13C-205ENST00000558088 ENPP3O14638 875 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 GRM6O15303 877 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 PRR35P0CG20 571 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 PPP3CBP16298 524 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 KELP23276 732 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 CERS1P27544 350 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 MTNR1BP49286 362 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 GYS2P54840 703 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 STAT4Q14765 748 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 TMEM119Q4V9L6 283 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 CAMKK1Q8N5S9 505 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
VPS13C-205ENST00000558088 TMX3Q96JJ7 454 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 PBKQ96KB5 322 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 ALG8Q9BVK2 526 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 IMPG2Q9BZV3 1241 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 KLC4Q9NSK0 619 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 JKAMPQ9P055 326 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 INTUQ9ULD6 942 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 AOX1Q06278 1338 aa3.68□□□□□ -1.82
VPS13C-205ENST00000558088 E7ENX8 843 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 SUN1O94901 812 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 EBLN1P0CF75 366 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 GPR3P46089 330 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 NPTX2P47972 431 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 CCT8P50990 548 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 CCT4P50991 539 aaKnown RBP3.67□□□□□ -1.82
VPS13C-205ENST00000558088 TAP2Q03519 686 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 ZNF626Q68DY1 528 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 STRA8Q7Z7C7 330 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 CFAP52Q8N1V2 620 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 OR2I1PQ8NGU4 316 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 DENND1AQ8TEH3 1009 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 SSH1Q8WYL5 1049 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 DPF2Q92785 391 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 ZBTB9Q96C00 473 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 SMOQ99835 787 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 VTA1Q9NP79 307 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 CTTNBP2NLQ9P2B4 639 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 TBC1D30Q9Y2I9 924 aa3.67□□□□□ -1.82
VPS13C-205ENST00000558088 A0A0B4J269 797 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 TRIAP1O43715 76 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 CD1AP06126 327 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 HNRNPCP07910 306 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS13C-205ENST00000558088 ELFN1P0C7U0 828 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 NR2F6P10588 404 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 SLC6A4P31645 630 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 SLC16A1P53985 500 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 CDC42EP1Q00587 391 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 TUBB3Q13509 450 aa3.66□□□□□ -1.82
VPS13C-205ENST00000558088 CLUL1Q15846 466 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms