RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 FAM124BQ9H5Z6 455 aaPredicted RBP18.09■□□□□ 0.49
SNX1-203ENST00000558040 CYP3A43Q9HB55 503 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 TTC3P53804 2025 aa18.09■□□□□ 0.49
SNX1-203ENST00000558040 PODXLO00592 558 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 FGBP02675 491 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 FECHP22830 423 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 CDK17Q00537 523 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 MEA1Q16626 185 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 SCARA3Q6AZY7 606 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 CYP26C1Q6V0L0 522 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 TMTC1Q8IUR5 882 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 TMEM130Q8N3G9 435 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 TTC39CQ8N584 583 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 KAT5Q92993 513 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 ELMO3Q96BJ8 720 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 CASD1Q96PB1 797 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 TBC1D13Q9NVG8 400 aa18.08■□□□□ 0.48
SNX1-203ENST00000558040 BZW2Q9Y6E2 419 aaKnown RBP18.08■□□□□ 0.48
SNX1-203ENST00000558040 TDRD15B5MCY1 1934 aaKnown RBP18.08■□□□□ 0.48
SNX1-203ENST00000558040 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 PPEF2O14830 753 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 GFPT2O94808 682 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 SERPING1P05155 500 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 USP8P40818 1118 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 ASPAP45381 313 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 WDR5P61964 334 aaKnown RBP18.07■□□□□ 0.48
SNX1-203ENST00000558040 SCARA5Q6ZMJ2 495 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 TOP1MTQ969P6 601 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 MMS19Q96T76 1030 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 ARID3AQ99856 593 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 BCO2Q9BYV7 579 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 GPR88Q9GZN0 384 aa18.07■□□□□ 0.48
SNX1-203ENST00000558040 TBKBP1A7MCY6 615 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 KPNA7A9QM74 516 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 FOXN3O00409 490 aaPredicted RBP18.06■□□□□ 0.48
SNX1-203ENST00000558040 UPP2O95045 317 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 SKILP12757 684 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 KRT5P13647 590 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 SYN1P17600 705 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 CLCNKBP51801 687 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 CCZ1BP86790 482 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 CCZ1P86791 482 aaPredicted RBP18.06■□□□□ 0.48
SNX1-203ENST00000558040 ARID5AQ03989 594 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 DSC1Q08554 894 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 KLHL30Q0D2K2 578 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 UPP1Q16831 310 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 TDRD12Q587J7 1177 aaKnown RBP18.06■□□□□ 0.48
SNX1-203ENST00000558040 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 FAM71AQ8IYT1 594 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 LRRC43Q8N309 656 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 KCNF1Q9H3M0 494 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 GDAP2Q9NXN4 497 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 ZMYND8Q9ULU4 1186 aaPredicted RBP18.06■□□□□ 0.48
SNX1-203ENST00000558040 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 PCDHB4Q9Y5E5 795 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 SNX9Q9Y5X1 595 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 NR2E3Q9Y5X4 410 aa18.06■□□□□ 0.48
SNX1-203ENST00000558040 ZBBXA8MT70 800 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 ARHGAP6O43182 974 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 DGKIO75912 1065 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 PRKCIP41743 596 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 BPIFB4P59827 614 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 LILRA4P59901 499 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
SNX1-203ENST00000558040 WDR59Q6PJI9 974 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 DCLRE1AQ6PJP8 1040 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 TMEM139Q8IV31 216 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 COLGALT2Q8IYK4 626 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 ZNF830Q96NB3 372 aaPredicted RBP18.05■□□□□ 0.48
SNX1-203ENST00000558040 DNAI2Q9GZS0 605 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 MTIF3Q9H2K0 278 aaKnown RBP18.05■□□□□ 0.48
SNX1-203ENST00000558040 CISHQ9NSE2 258 aa18.05■□□□□ 0.48
SNX1-203ENST00000558040 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNX1-203ENST00000558040 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 HUS1O60921 280 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 B3GAT3O94766 335 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 WEE2P0C1S8 567 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 PNMA6AP0CW24 399 aaPredicted RBP18.04■□□□□ 0.48
SNX1-203ENST00000558040 CD58P19256 250 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 ACO1P21399 889 aaKnown RBP18.04■□□□□ 0.48
SNX1-203ENST00000558040 GATMP50440 423 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 DEFB103AP81534 67 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 TMEM270Q6UE05 265 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 C16orf59Q7L2K0 433 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 DPH6Q7L8W6 267 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 IRF2BP2Q7Z5L9 587 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 CCDC170Q8IYT3 715 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 TOP6BLQ8N6T0 577 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 UBR7Q8N806 425 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 APPL2Q8NEU8 664 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 TMEM175Q9BSA9 504 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 DEF6Q9H4E7 631 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 SMYD3Q9H7B4 428 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
SNX1-203ENST00000558040 SSU72P8A0A1W2PR75 194 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms