RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ATG2AQ2TAZ0 1938 aa27.54■■■□□ 2
SMAD6-202ENST00000557916 M0QZQ0 153 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 PER2O15055 1255 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 PHACTR2O75167 634 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 FGFR1OPO95684 399 aaKnown RBP27.53■■■□□ 2
SMAD6-202ENST00000557916 STX1AQ16623 288 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 SV2CQ496J9 727 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 CCDC40Q4G0X9 1142 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 PRSS55Q6UWB4 352 aaPredicted RBP27.53■■■□□ 2
SMAD6-202ENST00000557916 PIK3R5Q8WYR1 880 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 SENP8Q96LD8 212 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 IGFLR1Q9H665 355 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 METTL14Q9HCE5 456 aaKnown RBP27.53■■■□□ 2
SMAD6-202ENST00000557916 PCDHB8Q9UN66 801 aa27.53■■■□□ 2
SMAD6-202ENST00000557916 KPNA7A9QM74 516 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 CST3P01034 146 aaPredicted RBP27.52■■■□□ 2
SMAD6-202ENST00000557916 C4BPAP04003 597 aaKnown RBP27.52■■■□□ 2
SMAD6-202ENST00000557916 HYAL1Q12794 435 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 MYO1EQ12965 1108 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 TRPC3Q13507 836 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 NFKBIBQ15653 356 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 TDRD10Q5VZ19 366 aaKnown RBP27.52■■■□□ 2
SMAD6-202ENST00000557916 PDXDC1Q6P996 788 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 APPL2Q8NEU8 664 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 LNX1Q8TBB1 728 aaPredicted RBP27.52■■■□□ 2
SMAD6-202ENST00000557916 EMILIN2Q9BXX0 1053 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 RXFP1Q9HBX9 757 aa27.52■■■□□ 2
SMAD6-202ENST00000557916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.52■■■□□ 2
SMAD6-202ENST00000557916 CNPP09543 421 aaKnown RBP27.51■■□□□ 1.99
SMAD6-202ENST00000557916 GTF2F1P35269 517 aaKnown RBP eCLIP27.51■■□□□ 1.99
SMAD6-202ENST00000557916 SV2AQ7L0J3 742 aa27.51■■□□□ 1.99
SMAD6-202ENST00000557916 FRMD5Q7Z6J6 570 aa27.51■■□□□ 1.99
SMAD6-202ENST00000557916 HPDLQ96IR7 371 aa27.51■■□□□ 1.99
SMAD6-202ENST00000557916 KLHL5Q96PQ7 755 aa27.51■■□□□ 1.99
SMAD6-202ENST00000557916 LETM1O95202 739 aaPredicted RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 GNA14O95837 355 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 GCLMP48507 274 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 CREMQ03060 361 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 PPP3CAQ08209 521 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 SKIV2LQ15477 1246 aaKnown RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 PSMD5Q16401 504 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 DUSP6Q16828 381 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 TPD52L1Q16890 204 aaPredicted RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 VARS2Q5ST30 1063 aaKnown RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 TCERG1LQ5VWI1 586 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 ANKS3Q6ZW76 656 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 CDCA3Q99618 268 aaPredicted RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 TIMM13Q9Y5L4 95 aaPredicted RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 SCN1AP35498 2009 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 CYB561D2O14569 222 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 TEX28O15482 410 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 STX10O60499 249 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 ODC1P11926 461 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 RPL17P18621 184 aaKnown RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 TYRO3Q06418 890 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 ZACNQ401N2 412 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 DCAF17Q5H9S7 520 aaPredicted RBP27.5■■□□□ 1.99
SMAD6-202ENST00000557916 MMRN2Q9H8L6 949 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 FNIP2Q9P278 1114 aa27.5■■□□□ 1.99
SMAD6-202ENST00000557916 ARHGEF37A1IGU5 675 aa27.49■■□□□ 1.99
SMAD6-202ENST00000557916 NCK2O43639 380 aa27.49■■□□□ 1.99
SMAD6-202ENST00000557916 CLASP2O75122 1294 aaKnown RBP27.49■■□□□ 1.99
SMAD6-202ENST00000557916 KLRC2P26717 231 aa27.49■■□□□ 1.99
SMAD6-202ENST00000557916 GTF2H1P32780 548 aa27.49■■□□□ 1.99
SMAD6-202ENST00000557916 C15orf39Q6ZRI6 1047 aa27.49■■□□□ 1.99
SMAD6-202ENST00000557916 REV3LO60673 3130 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 VWA8A3KMH1 1905 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 H7C4K7 107 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 TYMPP19971 482 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 MYL6P60660 151 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 NCOA4Q13772 614 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 MRPL58Q14197 206 aaKnown RBP27.48■■□□□ 1.99
SMAD6-202ENST00000557916 C11orf57Q6ZUT1 292 aaPredicted RBP27.48■■□□□ 1.99
SMAD6-202ENST00000557916 EFHBQ8N7U6 833 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 TMEM8AQ9HCN3 771 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 GDAP2Q9NXN4 497 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 MTRRQ9UBK8 725 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 SNX9Q9Y5X1 595 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 BACE2Q9Y5Z0 518 aa27.48■■□□□ 1.99
SMAD6-202ENST00000557916 FSD2A1L4K1 749 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 VNN1O95497 513 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 ADH1AP07327 375 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 CCDC192P0DO97 292 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 ATICP31939 592 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 NDUFV1P49821 464 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 YWHAHQ04917 246 aaPredicted RBP27.47■■□□□ 1.99
SMAD6-202ENST00000557916 KRT39Q6A163 491 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 GLYCTKQ8IVS8 523 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 SLC35C1Q96A29 364 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 CLSTN3Q9BQT9 956 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 DSEQ9UL01 958 aa27.47■■□□□ 1.99
SMAD6-202ENST00000557916 HUS1O60921 280 aa27.46■■□□□ 1.99
SMAD6-202ENST00000557916 MARSP56192 900 aaKnown RBP27.46■■□□□ 1.99
SMAD6-202ENST00000557916 ZNF280DQ6N043 979 aa27.46■■□□□ 1.99
SMAD6-202ENST00000557916 PPFIBP1Q86W92 1011 aa27.46■■□□□ 1.99
SMAD6-202ENST00000557916 DNAJC25Q9H1X3 360 aa27.46■■□□□ 1.99
SMAD6-202ENST00000557916 CLDND1Q9NY35 253 aa27.46■■□□□ 1.99
SMAD6-202ENST00000557916 EYSQ5T1H1 3165 aa27.45■■□□□ 1.99
SMAD6-202ENST00000557916 SYCE3A1L190 88 aa27.45■■□□□ 1.98
SMAD6-202ENST00000557916 LINC01565O15544 149 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms