RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LNX1Q8TBB1 728 aaPredicted RBP7.96□□□□□ -1.14
SPG11-204ENST00000557866 HELQQ8TDG4 1101 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 LMBR1Q8WVP7 490 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 TRIB2Q92519 343 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 CAPNS2Q96L46 248 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 FDXACB1Q9BRP7 624 aaPredicted RBP7.96□□□□□ -1.14
SPG11-204ENST00000557866 PI4K2AQ9BTU6 479 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 ADAMTS10Q9H324 1103 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 DEF6Q9H4E7 631 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 PDE11AQ9HCR9 933 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 RAB20Q9NX57 234 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 RBAKQ9NYW8 714 aaPredicted RBP7.96□□□□□ -1.14
SPG11-204ENST00000557866 ADAMTS1Q9UHI8 967 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 SALL4Q9UJQ4 1053 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 AKT3Q9Y243 479 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 Q9Y3F1 56 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 DAAM1Q9Y4D1 1078 aa7.96□□□□□ -1.14
SPG11-204ENST00000557866 WDR81Q562E7 1941 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 MBLAC1A4D2B0 266 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 INO80B-WBP1J3KQ70 363 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 OGTO15294 1046 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CLDN3O15551 220 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 VNN1O95497 513 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 LDHAP00338 332 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 HLA-DRAP01903 254 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 MYL3P08590 195 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CYBAP13498 195 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 FERP16591 822 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 RFX1P22670 979 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 IRS1P35568 1242 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 MATR3P43243 847 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPG11-204ENST00000557866 FLT3LGP49771 235 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 ADAM17P78536 824 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 ZNF200P98182 395 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 PRKCZQ05513 592 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CETN1Q12798 172 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 NOGQ13253 232 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 PRPF4BQ13523 1007 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 KIF22Q14807 665 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 TMEM132AQ24JP5 1023 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 KIAA0753Q2KHM9 967 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CCDC122Q5T0U0 273 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 ATF7IP2Q5U623 682 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 FIGNL1Q6PIW4 674 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 MPZL3Q6UWV2 235 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 RUFY4Q6ZNE9 571 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CDR2LQ86X02 465 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 SLC30A5Q8TAD4 765 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 CGRRF1Q99675 332 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 PACSIN1Q9BY11 444 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 OXCT2Q9BYC2 517 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 IFIH1Q9BYX4 1025 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 INO80BQ9C086 356 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 CDT1Q9H211 546 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 APOBEC3GQ9HC16 384 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 PRMT7Q9NVM4 692 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 CPSF3Q9UKF6 684 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 ATXN7L1Q9ULK2 861 aaPredicted RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 TNFSF13BQ9Y275 285 aa7.95□□□□□ -1.14
SPG11-204ENST00000557866 BZW2Q9Y6E2 419 aaKnown RBP7.95□□□□□ -1.14
SPG11-204ENST00000557866 PLXNA1Q9UIW2 1896 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 RRN3P2A6NIE6 340 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 CTIFO43310 598 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 OIP5O43482 229 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 DUSP11O75319 330 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 GPR32O75388 356 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 URI1O94763 535 aaPredicted RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 IPO7O95373 1038 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 AKR1A1P14550 325 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 TNNI1P19237 187 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 FGFR4P22455 802 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 ANXA13P27216 316 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 TMOD1P28289 359 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 HOXC8P31273 242 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 CPT1AP50416 773 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 CHMP4BP1P59074 171 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 AMPD2Q01433 879 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NCOA4Q13772 614 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 FSCN1Q16658 493 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 DEFB115Q30KQ5 88 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 MFSD14CQ5VZR4 134 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NFRKBQ6P4R8 1299 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NLRP8Q86W28 1048 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 TMEM192Q8IY95 271 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 FAM71AQ8IYT1 594 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 TMEM130Q8N3G9 435 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 BEND7Q8N7W2 519 aaPredicted RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 CEP120Q8N960 986 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 FBXL13Q8NEE6 735 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 SLC20A1Q8WUM9 679 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 SHC3Q92529 594 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 DHX38Q92620 1227 aaKnown RBP7.94□□□□□ -1.14
SPG11-204ENST00000557866 CPB2Q96IY4 423 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 NT5C1BQ96P26 610 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 FNBP1Q96RU3 617 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPG11-204ENST00000557866 TSGA10Q9BZW7 698 aa7.94□□□□□ -1.14
SPG11-204ENST00000557866 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms