RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 ODC1P11926 461 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 PLD1Q13393 1074 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 TMEM132DQ14C87 1099 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 UBXN2BQ14CS0 331 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 PTPAQ15257 358 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 ZC2HC1CQ53FD0 456 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-235ENST00000557740 SLC44A4Q53GD3 710 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 SPATA1Q5VX52 437 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 ADALQ6DHV7 355 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 OVOS1Q6IE37 1185 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 SLFN12LQ6IEE8 588 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 SLC39A4Q6P5W5 647 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 SFR1Q86XK3 245 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 LEMD2Q8NC56 503 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 TCEAL4Q96EI5 215 aa15.88■□□□□ 0.13
SHMT2-235ENST00000557740 FBXO2Q9UK22 296 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-235ENST00000557740 CPSF3Q9UKF6 684 aaKnown RBP15.88■□□□□ 0.13
SHMT2-235ENST00000557740 FAM186AA6NE01 2351 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 PPEF2O14830 753 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 MICAL2O94851 1124 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 OR4Q2P0C623 313 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 MYL4P12829 197 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 TYMPP19971 482 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 PAX3P23760 479 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 CEBPZQ03701 1054 aaKnown RBP15.87■□□□□ 0.13
SHMT2-235ENST00000557740 RESTQ13127 1097 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 USP49Q70CQ1 688 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 DYMQ7RTS9 669 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 ELSPBP1Q96BH3 223 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 HVCN1Q96D96 273 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 PGLYRP2Q96PD5 576 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 BCO2Q9BYV7 579 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 ST6GALNAC4Q9H4F1 302 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 ZFP14Q9HCL3 533 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 DLGAP2Q9P1A6 1054 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 CEP72Q9P209 647 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 AGO2Q9UKV8 859 aaKnown RBP15.87■□□□□ 0.13
SHMT2-235ENST00000557740 DERAQ9Y315 318 aa15.87■□□□□ 0.13
SHMT2-235ENST00000557740 SRPRBQ9Y5M8 271 aaKnown RBP15.87■□□□□ 0.13
SHMT2-235ENST00000557740 PDCD11Q14690 1871 aaKnown RBP15.86■□□□□ 0.13
SHMT2-235ENST00000557740 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 TISP43B9A030 160 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 ANKRD63C9JTQ0 380 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 GAP43P17677 238 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 SYT1P21579 422 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 CCR2P41597 374 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 ACOT2P49753 483 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 LILRA4P59901 499 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 MYBPC2Q14324 1141 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 FAM78AQ5JUQ0 283 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 C9orf57Q5W0N0 161 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 TANGO2Q6ICL3 276 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 ARMCX5Q6P1M9 558 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 ZC3H14Q6PJT7 736 aaKnown RBP15.86■□□□□ 0.13
SHMT2-235ENST00000557740 TPRG1Q6ZUI0 275 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 SV2BQ7L1I2 683 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 HS6ST3Q8IZP7 471 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 KCNG4Q8TDN1 519 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 SENP8Q96LD8 212 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 DDX23Q9BUQ8 820 aaKnown RBP15.86■□□□□ 0.13
SHMT2-235ENST00000557740 PLA2G2FQ9BZM2 168 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 SLITRK6Q9H5Y7 841 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 ASB7Q9H672 318 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 MRPL44Q9H9J2 332 aaKnown RBP15.86■□□□□ 0.13
SHMT2-235ENST00000557740 SEL1LQ9UBV2 794 aa15.86■□□□□ 0.13
SHMT2-235ENST00000557740 NOTCH4Q99466 2003 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 LRRN2O75325 713 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 FCARP24071 287 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 ALDH1A3P47895 512 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 EPHB3P54753 998 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 GPR17Q13304 367 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 GRM2Q14416 872 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 POSTNQ15063 836 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 FAM173BQ6P4H8 233 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 ZNF720Q7Z2F6 126 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 POMGNT1Q8WZA1 660 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 DNASE1L2Q92874 299 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 SMARCD2Q92925 531 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
SHMT2-235ENST00000557740 ASB16Q96NS5 453 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 CLIC6Q96NY7 704 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 OSBPL6Q9BZF3 934 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 BRD9Q9H8M2 597 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 LTB4R2Q9NPC1 389 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 EXOC7Q9UPT5 735 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 C2CD2Q9Y426 696 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 STYXL1Q9Y6J8 313 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 GVINP1Q7Z2Y8 2422 aa15.85■□□□□ 0.13
SHMT2-235ENST00000557740 FAM170BA6NMN3 283 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 SPTLC1O15269 473 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 VNN2O95498 520 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 GLULP15104 373 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 CD72P21854 359 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 STAT6P42226 847 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 MAGEA9P43362 315 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 EPHA5P54756 1037 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 DUSP4Q13115 394 aa15.84■□□□□ 0.13
SHMT2-235ENST00000557740 POTEHQ6S545 545 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms