RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 OR5B17Q8NGF7 314 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 SNIP1Q8TAD8 396 aaKnown RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 SPPL3Q8TCT6 385 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 PARD3BQ8TEW8 1205 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 ARNTL2Q8WYA1 636 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 ZNF558Q96NG5 402 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 TSPAN18Q96SJ8 248 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 POP1Q99575 1024 aaKnown RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
CHD8-214ENST00000557727 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 KIAA1586Q9HCI6 787 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 MTMR10Q9NXD2 777 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 RWDD3Q9Y3V2 267 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 COL6A3P12111 3177 aa9.77□□□□□ -0.85
CHD8-214ENST00000557727 PTPRDP23468 1912 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 LRRIQ3A6PVS8 624 aaPredicted RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 PIRO00625 290 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 FSCN2O14926 492 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 EXOC3O60645 756 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 FGF18O76093 207 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 DXOO77932 396 aaKnown RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 PPP1R2P41236 205 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 AARSP49588 968 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHD8-214ENST00000557727 STX17P56962 302 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 ADAM9Q13443 819 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 HSP90AA2PQ14568 343 aaPredicted RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 C9orf57Q5W0N0 161 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 LMBRD2Q68DH5 695 aaPredicted RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 KLHL10Q6JEL2 608 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 C15orf39Q6ZRI6 1047 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 TAS1R1Q7RTX1 841 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 CGRRF1Q99675 332 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 GPR62Q9BZJ7 368 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 HSD3B7Q9H2F3 369 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 ALG13Q9NP73 1137 aaKnown RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 INTS13Q9NVM9 706 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 GMPR2Q9P2T1 348 aaKnown RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 RWDD2AQ9UIY3 292 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 UBQLN1Q9UMX0 589 aaKnown RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 LZTS1Q9Y250 596 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 PRG3Q9Y2Y8 225 aaPredicted RBP9.76□□□□□ -0.85
CHD8-214ENST00000557727 DOCK6Q96HP0 2047 aa9.76□□□□□ -0.85
CHD8-214ENST00000557727 PODXLO00592 558 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 SPTLC1O15269 473 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 SLC16A3O15427 465 aaKnown RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 LILRB3O75022 631 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 PTMSP20962 102 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 RPL9P32969 192 aaKnown RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 IRS1P35568 1242 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 PPM1AP35813 382 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 OR1G1P47890 313 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 ALDH7A1P49419 539 aaKnown RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 ERVFC1P60507 584 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 FKBP3Q00688 224 aaKnown RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 TYRO3Q06418 890 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 ENPEPQ07075 957 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 BFSP1Q12934 665 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 GPM6BQ13491 265 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 STIM1Q13586 685 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 DDX53Q86TM3 631 aaKnown RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 WDR49Q8IV35 697 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 DEFB123Q8N688 67 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 CCDC127Q96BQ5 260 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 CEP63Q96MT8 703 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 UROC1Q96N76 676 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 CDX2Q99626 313 aaPredicted RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
CHD8-214ENST00000557727 ZBP1Q9H171 429 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 CHST7Q9NS84 486 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 SLC38A7Q9NVC3 462 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 ADAM28Q9UKQ2 775 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 FAN1Q9Y2M0 1017 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 PCDHB12Q9Y5F1 795 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 PCDHGC5Q9Y5F6 944 aa9.75□□□□□ -0.85
CHD8-214ENST00000557727 C2orf16Q68DN1 1984 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 CETN3O15182 167 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 VNN1O95497 513 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 C4BPAP04003 597 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 ALDH2P05091 517 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 TRIM49P0CI25 452 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 TRIM49CP0CI26 452 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 RPL13P26373 211 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 PSMC2P35998 433 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 BRCC3P46736 316 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 UBE3AQ05086 875 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 PPP3CAQ08209 521 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 NCAPHQ15003 741 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 TIGD5Q53EQ6 642 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 CT47A1Q5JQC4 288 aaPredicted RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 SPOUT1Q5T280 376 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 KIAA0319Q5VV43 1072 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms