RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 LMNB2Q03252 620 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 DMP1Q13316 513 aaPredicted RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 RINT1Q6NUQ1 792 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 TXNDC11Q6PKC3 985 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 TMC8Q8IU68 726 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 TTC9BQ8N6N2 239 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 IRF7Q92985 503 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 SECISBP2LQ93073 1101 aaKnown RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 ZFYVE19Q96K21 471 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 ZNF512Q96ME7 567 aaPredicted RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 LRRC3BQ96PB8 259 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 TMEM209Q96SK2 561 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 MMTAG2Q9BU76 263 aaKnown RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 LRRC3Q9BY71 257 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
LGMN-219ENST00000557725 SLITRK6Q9H5Y7 841 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 ASAH2Q9NR71 780 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 GMEB2Q9UKD1 530 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 PCDHB6Q9Y5E3 794 aa12.67□□□□□ -0.38
LGMN-219ENST00000557725 LAMA1P25391 3075 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 PPEF2O14830 753 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 HRO43593 1189 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 MUTP22033 750 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 RPL9P32969 192 aaKnown RBP12.66□□□□□ -0.38
LGMN-219ENST00000557725 TNFSF9P41273 254 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 EPHA5P54756 1037 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 DUSP4Q13115 394 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 PTGDRQ13258 359 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
LGMN-219ENST00000557725 TPGS2Q68CL5 300 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 APBB1IPQ7Z5R6 666 aaPredicted RBP12.66□□□□□ -0.38
LGMN-219ENST00000557725 MFSD6LQ8IWD5 586 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 ELMOD1Q8N336 334 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
LGMN-219ENST00000557725 IGSF22Q8N9C0 903 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 PLIN2Q99541 437 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 TSC2P49815 1807 aa12.66□□□□□ -0.38
LGMN-219ENST00000557725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.65□□□□□ -0.38
LGMN-219ENST00000557725 PRR5-ARHGAP8B1AHC4 643 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 K7ESF4 209 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 MICAL2O94851 1124 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 KCNA4P22459 653 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 CXCL12P48061 93 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 CCR3P51677 355 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 ARHGAP8P85298 464 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 SIM2Q14190 667 aaPredicted RBP12.65□□□□□ -0.38
LGMN-219ENST00000557725 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.389e-7■□□□□ 9.1
LGMN-219ENST00000557725 CCDC6Q16204 474 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 FBXO18Q8NFZ0 1043 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 DEPDC1BQ8WUY9 529 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 RTKNQ9BST9 563 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
LGMN-219ENST00000557725 TRPV4Q9HBA0 871 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 DNM3Q9UQ16 869 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 NUP210Q8TEM1 1887 aaPredicted RBP12.65□□□□□ -0.38
LGMN-219ENST00000557725 SDK1Q7Z5N4 2213 aa12.65□□□□□ -0.38
LGMN-219ENST00000557725 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
LGMN-219ENST00000557725 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 KPNA1P52294 538 aaPredicted RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 YWHAHQ04917 246 aaPredicted RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 TNK2Q07912 1038 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 ORC2Q13416 577 aaPredicted RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 GNL2Q13823 731 aaKnown RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 PPM1JQ5JR12 505 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 LAIR1Q6GTX8 287 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 PKN3Q6P5Z2 889 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 TMEM161BQ8NDZ6 487 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 APPL2Q8NEU8 664 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 BEST2Q8NFU1 509 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 CSGALNACT1Q8TDX6 532 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 SMG9Q9H0W8 520 aaKnown RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 TRPV5Q9NQA5 729 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 SEMA4GQ9NTN9 838 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
LGMN-219ENST00000557725 GTSE1Q9NYZ3 720 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
LGMN-219ENST00000557725 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
LGMN-219ENST00000557725 SPECC1L-ADORA2AF8WAN1 911 aa12.63□□□□□ -0.39
LGMN-219ENST00000557725 M0QZQ0 153 aa12.63□□□□□ -0.39
LGMN-219ENST00000557725 PRAMEF12O95522 483 aa12.63□□□□□ -0.39
LGMN-219ENST00000557725 RETP07949 1114 aa12.63□□□□□ -0.39
LGMN-219ENST00000557725 ADRB1P08588 477 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms