RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 HYAL3O43820 417 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 PRPF40AO75400 957 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 CSDE1O75534 798 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 EFEMP2O95967 443 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 POMCP01189 267 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 C8AP07357 584 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 POU2F2P09086 479 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 CCDC192P0DO97 292 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TROAPQ12815 778 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 NMIQ13287 307 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 SYCP1Q15431 976 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 UBE2SQ16763 222 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 IMMTQ16891 758 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 PABPC1LQ4VXU2 614 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 CEP55Q53EZ4 464 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TCEAL6Q6IPX3 200 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 C1orf228Q6PIY5 440 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 AGMOQ6ZNB7 445 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 KBTBD6Q86V97 674 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 OTUD7AQ8TE49 926 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 ING5Q8WYH8 240 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TCEAL3Q969E4 200 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 FAM167AQ96KS9 214 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 BBC3Q96PG8 261 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 MKNK1Q9BUB5 465 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TRMT61BQ9BVS5 477 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 INO80BQ9C086 356 aaPredicted RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TRPV5Q9NQA5 729 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 CACNA2D2Q9NY47 1150 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 TMEM63CQ9P1W3 806 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 NXF1Q9UBU9 619 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 KLK13Q9UKR3 277 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 MRPS23Q9Y3D9 190 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 PCDHB2Q9Y5E7 798 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 USP3Q9Y6I4 520 aa7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 ASCC3Q8N3C0 2202 aaKnown RBP7.57□□□□□ -1.2
SPTLC2-206ENST00000557566 HECTD1Q9ULT8 2610 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 CYSRT1A8MQ03 144 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 AKAP3O75969 853 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 RPL17P18621 184 aaKnown RBP7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 RDXP35241 583 aaKnown RBP7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 SCNN1AP37088 669 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 FGD1P98174 961 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 GRM2Q14416 872 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 TAF3Q5VWG9 929 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 TANGO2Q6ICL3 276 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 RIPOR1Q6ZS17 1223 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 COLGALT2Q8IYK4 626 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 MCRS1Q96EZ8 462 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 B3GALT6Q96L58 329 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 COLEC11Q9BWP8 271 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 SPZ1Q9BXG8 430 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 ZFP14Q9HCL3 533 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 ZNF334Q9HCZ1 680 aaPredicted RBP7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 TIMMDC1Q9NPL8 285 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 TMEM9BQ9NQ34 198 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 TCEAL9Q9UHQ7 104 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 ASXL3Q9C0F0 2248 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 CFAP46Q8IYW2 2715 aa7.56□□□□□ -1.2
SPTLC2-206ENST00000557566 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 APC2O95996 2303 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 CACNA1EQ15878 2313 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 CCDC163A0A0D9SF12 145 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 LNP1A1A4G5 178 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 ERICH2A1L162 156 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 CDC14CA4D256 554 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 EML1O00423 815 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 PSAPP07602 524 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 CCNE1P24864 410 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 GDI1P31150 447 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 SERPINB4P48594 390 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 MLLT6P55198 1093 aaPredicted RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 DGKKQ5KSL6 1271 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 FUT10Q6P4F1 479 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 CATSPER4Q7RTX7 472 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 MRPL10Q7Z7H8 261 aaKnown RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 DEFB124Q8NES8 71 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 SLC7A14Q8TBB6 771 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 RHBDD1Q8TEB9 315 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 ZC3H10Q96K80 434 aaKnown RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 NIFKQ9BYG3 293 aaKnown RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 SLC32A1Q9H598 525 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 UBN1Q9NPG3 1134 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 DIAPH3Q9NSV4 1193 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 RBM12Q9NTZ6 932 aaKnown RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 HCFC1R1Q9NWW0 138 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 USP25Q9UHP3 1055 aa7.55□□□□□ -1.2
SPTLC2-206ENST00000557566 A0A087WZ62 844 aa7.54□□□□□ -1.2
SPTLC2-206ENST00000557566 SYCE3A1L190 88 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms