RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PROB1E7EW31 1015 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 GRM6O15303 877 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 SUN1O94901 812 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 PRKCGP05129 697 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 MASP1P48740 699 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 MC2RQ01718 297 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 FPGSQ05932 587 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF844Q08AG5 666 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 TARDBPQ13148 414 aaKnown RBP eCLIP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 DYRK1AQ13627 763 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 CD300EQ496F6 205 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 FLYWCH1Q4VC44 716 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 PABPC1LQ4VXU2 614 aaKnown RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 CT47A1Q5JQC4 288 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 UTP14CQ5TAP6 766 aaKnown RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 FCRLBQ6BAA4 426 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 TSHZ1Q6ZSZ6 1077 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 AMIGO2Q86SJ2 522 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 ADGRG5Q8IZF4 528 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 Q8N9P0 234 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 TOR1AIP2Q8NFQ8 470 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 IFI44Q8TCB0 444 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 COG1Q8WTW3 980 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 SSH1Q8WYL5 1049 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 DDB2Q92466 427 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 RAB24Q969Q5 203 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 KLHL32Q96NJ5 620 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 SLKQ9H2G2 1235 aaPredicted RBP3.54□□□□□ -1.84
FOXN3-216ENST00000557496 ADAM21Q9UKJ8 722 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 INTUQ9ULD6 942 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 WNT6Q9Y6F9 365 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 AOX1Q06278 1338 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 WASHC2AQ641Q2 1341 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 CCDC195A0A1B0GUA6 201 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 TRIM75PA6NK02 468 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 VWC2LB2RUY7 222 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 MTHFD1P11586 935 aaKnown RBP3.53□□□□□ -1.84
FOXN3-216ENST00000557496 PPP3CBP16298 524 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 CPEP16870 476 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 CDC42EP1Q00587 391 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 HLXQ14774 488 aaPredicted RBP3.53□□□□□ -1.84
FOXN3-216ENST00000557496 KIAA1614Q5VZ46 1190 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF425Q6IV72 752 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF365Q70YC5 407 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 MIGA2Q7L4E1 593 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 C9orf106Q8NAJ2 232 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 IL17RDQ8NFM7 739 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 WDR66Q8TBY9 1149 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 SNX19Q92543 992 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 TMX3Q96JJ7 454 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 TDP1Q9NUW8 608 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 JKAMPQ9P055 326 aa3.53□□□□□ -1.84
FOXN3-216ENST00000557496 WDR91A4D1P6 747 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 LINC01548A6NM66 108 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 GCOM1H8Y6P7 765 aaPredicted RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 TOR1BO14657 336 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 SLC43A1O75387 559 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 CD1AP06126 327 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 CHRM2P08172 466 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 VIL1P09327 827 aaKnown RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 HSD3B2P26439 372 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 HNRNPMP52272 730 aaKnown RBP eCLIP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 EXOSC10Q01780 885 aaKnown RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 ITIH3Q06033 890 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 KLF1Q13351 362 aaPredicted RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 EZH2Q15910 746 aaKnown RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 PREPLQ4J6C6 727 aaPredicted RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 RNF219Q5W0B1 726 aaPredicted RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 RSPH3Q86UC2 560 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 AMOTL1Q8IY63 956 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 CFAP52Q8N1V2 620 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 NSUN7Q8NE18 718 aaKnown RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 TMIEQ8NEW7 156 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 LRIG1Q96JA1 1093 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 PACSIN1Q9BY11 444 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 FLRT1Q9NZU1 646 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 TUBD1Q9UJT1 453 aa3.52□□□□□ -1.85
FOXN3-216ENST00000557496 SETD1BQ9UPS6 1966 aaKnown RBP3.52□□□□□ -1.85
FOXN3-216ENST00000557496 TLDC2A0PJX2 215 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 E7ENX8 843 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 SGTAO43765 313 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 URI1O94763 535 aaPredicted RBP3.51□□□□□ -1.85
FOXN3-216ENST00000557496 NXPH1P58417 271 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 ZNF280AP59817 542 aaPredicted RBP3.51□□□□□ -1.85
FOXN3-216ENST00000557496 POU6F2P78424 691 aaPredicted RBP3.51□□□□□ -1.85
FOXN3-216ENST00000557496 SSBP2P81877 361 aaPredicted RBP3.51□□□□□ -1.85
FOXN3-216ENST00000557496 TFF2Q03403 129 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 TAP2Q03519 686 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 PIGFQ07326 219 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 KRT26Q7Z3Y9 468 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 PPM1NQ8N819 430 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 ZNF366Q8N895 744 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 PDPRQ8NCN5 879 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 B3GALNT2Q8NCR0 500 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 PBKQ96KB5 322 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 MRGPRX4Q96LA9 322 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 KLC4Q9NSK0 619 aa3.51□□□□□ -1.85
FOXN3-216ENST00000557496 SAP30BPQ9UHR5 308 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms