RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LILRA4P59901 499 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 KMT5BQ4FZB7 885 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 TPGS2Q68CL5 300 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 LILRA6Q6PI73 481 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 KRBA2Q6ZNG9 492 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 EPM2AIP1Q7L775 607 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-206ENST00000557358 RNF135Q8IUD6 432 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 ELMOD1Q8N336 334 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 XXYLT1Q8NBI6 393 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 ZNF461Q8TAF7 563 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 SCFD1Q8WVM8 642 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 FGFBP2Q9BYJ0 223 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 PRKD2Q9BZL6 878 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 POLIQ9UNA4 740 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 PLXNA3P51805 1871 aa14.93□□□□□ -0.02
VPS33B-206ENST00000557358 EXOC3O60645 756 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 LRG1P02750 347 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 RPN1P04843 607 aaKnown RBP14.92□□□□□ -0.02
VPS33B-206ENST00000557358 KRT19P08727 400 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 SP100P23497 879 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-206ENST00000557358 CASP1P29466 404 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 CYP2J2P51589 502 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 GUCY2FP51841 1108 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 EHHADHQ08426 723 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 MYO1EQ12965 1108 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 BMT2Q1RMZ1 405 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 OVOS1Q6IE37 1185 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 SLC8B1Q6J4K2 584 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 CD300LGQ6UXG3 332 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 CRELD2Q6UXH1 353 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-206ENST00000557358 THEM5Q8N1Q8 247 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 CHAMP1Q96JM3 812 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 SENP8Q96LD8 212 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 GTPBP4Q9BZE4 634 aaKnown RBP14.92□□□□□ -0.02
VPS33B-206ENST00000557358 IKZF4Q9H2S9 585 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 AGPAT3Q9NRZ7 376 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 ITGA11Q9UKX5 1188 aa14.92□□□□□ -0.02
VPS33B-206ENST00000557358 ANK1P16157 1881 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 BDP1A6H8Y1 2624 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 PI4K2BG5E9Z4 385 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 PIRO00625 290 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 CALUO43852 315 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-206ENST00000557358 RFPL2O75678 378 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 OAZ2O95190 189 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 SMC2O95347 1197 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 TNNI1P19237 187 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 GBP2P32456 591 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-206ENST00000557358 AARSP49588 968 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■■■■ 30.6
VPS33B-206ENST00000557358 RBP5P82980 135 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 ROR1Q01973 937 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 SNRNP35Q16560 246 aaKnown RBP14.91□□□□□ -0.02
VPS33B-206ENST00000557358 DUOXA2Q1HG44 320 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 CSGALNACT2Q8N6G5 542 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 SLC7A14Q8TBB6 771 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 CYP4F11Q9HBI6 524 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 WDR6Q9NNW5 1121 aaKnown RBP14.91□□□□□ -0.02
VPS33B-206ENST00000557358 CD320Q9NPF0 282 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS33B-206ENST00000557358 FBXL5Q9UKA1 691 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 CLUHO75153 1309 aa14.91□□□□□ -0.02
VPS33B-206ENST00000557358 ANO9A1A5B4 782 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 KPNA7A9QM74 516 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 CYB561D2O14569 222 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 CLIC2O15247 247 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 HUS1O60921 280 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 ATF2P15336 505 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 PLD1Q13393 1074 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 MRPL58Q14197 206 aaKnown RBP14.9□□□□□ -0.02
VPS33B-206ENST00000557358 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 TMEM31Q5JXX7 168 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 C12orf56Q8IXR9 622 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 EFCAB13Q8IY85 973 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 ZDHHC14Q8IZN3 488 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 LRRC52Q8N7C0 313 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 RDH13Q8NBN7 331 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 GLIS3Q8NEA6 775 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 PDE11AQ9HCR9 933 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 AFF4Q9UHB7 1163 aaKnown RBP14.9□□□□□ -0.02
VPS33B-206ENST00000557358 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 FRMD4BQ9Y2L6 1034 aa14.9□□□□□ -0.02
VPS33B-206ENST00000557358 ZFP37Q9Y6Q3 630 aaPredicted RBP14.9□□□□□ -0.02
VPS33B-206ENST00000557358 C2CD4DB7Z1M9 353 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 CCL16O15467 120 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 ADAM12O43184 909 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 KLRC4O43908 158 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 KINO60870 393 aaKnown RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 RHOBTB3O94955 611 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 CLSTN1O94985 981 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 ITGB3P05106 788 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 POU2F2P09086 479 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 DLATP10515 647 aaKnown RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 IGFBP6P24592 240 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
VPS33B-206ENST00000557358 STK4Q13043 487 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 KCNB1Q14721 858 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 IQCEQ6IPM2 695 aa14.89□□□□□ -0.03
VPS33B-206ENST00000557358 CBWD2Q8IUF1 395 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms