RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 TYRO3Q06418 890 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 STX1AQ16623 288 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 C15orf39Q6ZRI6 1047 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 VN1R2Q8NFZ6 395 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 LNX1Q8TBB1 728 aaPredicted RBP22.55■■□□□ 1.2
SEC23A-213ENST00000557280 PIK3R5Q8WYR1 880 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 SENP8Q96LD8 212 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 IGFLR1Q9H665 355 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 MMRN2Q9H8L6 949 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 PCDHB8Q9UN66 801 aa22.55■■□□□ 1.2
SEC23A-213ENST00000557280 ADAM12O43184 909 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 TRAPPC3O43617 180 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 CLASP2O75122 1294 aaKnown RBP22.54■■□□□ 1.2
SEC23A-213ENST00000557280 BIRC3Q13489 604 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 DUSP6Q16828 381 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 ZACNQ401N2 412 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 DCAF17Q5H9S7 520 aaPredicted RBP22.54■■□□□ 1.2
SEC23A-213ENST00000557280 RSPO2Q6UXX9 243 aaPredicted RBP22.54■■□□□ 1.2
SEC23A-213ENST00000557280 DSTYKQ6XUX3 929 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 SV2AQ7L0J3 742 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 FILIP1Q7Z7B0 1213 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 LRRC52Q8N7C0 313 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 ZNF560Q96MR9 790 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 TLE6Q9H808 572 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 DACH1Q9UI36 760 aa22.54■■□□□ 1.2
SEC23A-213ENST00000557280 KPNA7A9QM74 516 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 TEX28O15482 410 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 ERCC5P28715 1186 aaPredicted RBP22.53■■□□□ 1.2
SEC23A-213ENST00000557280 MYL6P60660 151 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 ENPEPQ07075 957 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 PSMD5Q16401 504 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 SV2CQ496J9 727 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 CCDC40Q4G0X9 1142 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 VARS2Q5ST30 1063 aaKnown RBP22.53■■□□□ 1.2
SEC23A-213ENST00000557280 GLYCTKQ8IVS8 523 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 SLC35C1Q96A29 364 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 KLHL5Q96PQ7 755 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 PRDM6Q9NQX0 595 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 ARMCX3Q9UH62 379 aaPredicted RBP22.53■■□□□ 1.2
SEC23A-213ENST00000557280 COL6A3P12111 3177 aa22.53■■□□□ 1.2
SEC23A-213ENST00000557280 SYCE3A1L190 88 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 IKBKBO14920 756 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 SYN3O14994 580 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 GLP2RO95838 553 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 TCERG1LQ5VWI1 586 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 IRF2BP1Q8IU81 584 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 HPDLQ96IR7 371 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 CLSTN3Q9BQT9 956 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 XYLT2Q9H1B5 865 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 DNAJC25Q9H1X3 360 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 RXFP1Q9HBX9 757 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 ANO10Q9NW15 660 aa22.52■■□□□ 1.2
SEC23A-213ENST00000557280 CYB561D2O14569 222 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 PHACTR2O75167 634 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 LRRN2O75325 713 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 PNPLA4P41247 253 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 AP3M2P53677 418 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 NCOA4Q13772 614 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 BMS1Q14692 1282 aaKnown RBP22.51■■□□□ 1.19
SEC23A-213ENST00000557280 COL19A1Q14993 1142 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 CBWD6Q4V339 395 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 HSP90AA4PQ58FG1 418 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 CBWD3Q5JTY5 395 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 CBWD5Q5RIA9 395 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 LLGL2Q6P1M3 1020 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 FRMD5Q7Z6J6 570 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 USP37Q86T82 979 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 TAS1R2Q8TE23 839 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 CNOT6LQ96LI5 555 aaKnown RBP22.51■■□□□ 1.19
SEC23A-213ENST00000557280 FUCA2Q9BTY2 467 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 TMEM8AQ9HCN3 771 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 MTRRQ9UBK8 725 aa22.51■■□□□ 1.19
SEC23A-213ENST00000557280 HLA-DRAP01903 254 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 ODC1P11926 461 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 TRPC3Q13507 836 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 KCNC3Q14003 757 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 MRPL58Q14197 206 aaKnown RBP22.5■■□□□ 1.19
SEC23A-213ENST00000557280 SKIV2LQ15477 1246 aaKnown RBP22.5■■□□□ 1.19
SEC23A-213ENST00000557280 WSCD1Q658N2 575 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 GPR65Q8IYL9 337 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 PPP2R3CQ969Q6 453 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 METTL14Q9HCE5 456 aaKnown RBP22.5■■□□□ 1.19
SEC23A-213ENST00000557280 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.5■■□□□ 1.19
SEC23A-213ENST00000557280 L1RE1Q9UN81 338 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 SSX2IPQ9Y2D8 614 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 SNX9Q9Y5X1 595 aa22.5■■□□□ 1.19
SEC23A-213ENST00000557280 SPTBN5Q9NRC6 3674 aaKnown RBP22.5■■□□□ 1.19
SEC23A-213ENST00000557280 PLXNA3P51805 1871 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 PRUNE2Q8WUY3 3088 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 TBC1D4O60343 1298 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 TBX10O75333 385 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 EPCAMP16422 314 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 TYMPP19971 482 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 PIK3CAP42336 1068 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 MXI1P50539 228 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 MARSP56192 900 aaKnown RBP22.49■■□□□ 1.19
SEC23A-213ENST00000557280 DLX2Q07687 328 aaPredicted RBP22.49■■□□□ 1.19
SEC23A-213ENST00000557280 CTC1Q2NKJ3 1217 aa22.49■■□□□ 1.19
SEC23A-213ENST00000557280 SKOR2Q2VWA4 1001 aaPredicted RBP22.49■■□□□ 1.19
SEC23A-213ENST00000557280 ANO6Q4KMQ2 910 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms