RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 DSTYKQ6XUX3 929 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 USP37Q86T82 979 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 HS6ST3Q8IZP7 471 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 LEMD2Q8NC56 503 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 BEST2Q8NFU1 509 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 LARP4BQ92615 738 aaKnown RBP17.27■□□□□ 0.36
TUBB3-213ENST00000557262 BCO2Q9BYV7 579 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 ZFP14Q9HCL3 533 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 CEP72Q9P209 647 aa17.27■□□□□ 0.36
TUBB3-213ENST00000557262 MTF2Q9Y483 593 aaPredicted RBP17.27■□□□□ 0.36
TUBB3-213ENST00000557262 TBCAO75347 108 aaKnown RBP17.26■□□□□ 0.35
TUBB3-213ENST00000557262 CD72P21854 359 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 PAX3P23760 479 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 CCR2P41597 374 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 UBXN2BQ14CS0 331 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 FAM78AQ5JUQ0 283 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 KCNG4Q8TDN1 519 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 FAM212AQ96EL1 285 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 FIZ1Q96SL8 496 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 MSTO1Q9BUK6 570 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 LTB4R2Q9NPC1 389 aa17.26■□□□□ 0.35
TUBB3-213ENST00000557262 CPSF3Q9UKF6 684 aaKnown RBP17.26■□□□□ 0.35
TUBB3-213ENST00000557262 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 LMNAP02545 664 aaKnown RBP17.25■□□□□ 0.35
TUBB3-213ENST00000557262 MYL4P12829 197 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 TYMPP19971 482 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 NMT1P30419 496 aaKnown RBP17.25■□□□□ 0.35
TUBB3-213ENST00000557262 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 EPHA5P54756 1037 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 LILRA4P59901 499 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 GPR17Q13304 367 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 CUL4AQ13619 759 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 JADE1Q6IE81 842 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 SLFN12LQ6IEE8 588 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 SLC39A4Q6P5W5 647 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 ZC3H14Q6PJT7 736 aaKnown RBP17.25■□□□□ 0.35
TUBB3-213ENST00000557262 MAP4K3Q8IVH8 894 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
TUBB3-213ENST00000557262 ASB16Q96NS5 453 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 TRMT61BQ9BVS5 477 aaKnown RBP17.25■□□□□ 0.35
TUBB3-213ENST00000557262 R4GN57 208 aa17.25■□□□□ 0.35
TUBB3-213ENST00000557262 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 VPS37CA5D8V6 355 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 NCAM2O15394 837 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 MOSPD3O75425 235 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 OR4Q2P0C623 313 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 PDCP20941 246 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 FCARP24071 287 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 MAGEA9P43362 315 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 PLD1Q13393 1074 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 MYBPC2Q14324 1141 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ZC2HC1CQ53FD0 456 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ZNF852Q6ZMS4 543 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 TPRG1Q6ZUI0 275 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 MAML2Q8IZL2 1156 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 DNASE1L2Q92874 299 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 SMARCD2Q92925 531 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 EPSTI1Q96J88 318 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 SENP8Q96LD8 212 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ZSWIM3Q96MP5 696 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 GPR88Q9GZN0 384 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ST6GALNAC4Q9H4F1 302 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ASB7Q9H672 318 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 BRD9Q9H8M2 597 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 ASAH2Q9NR71 780 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 HEBP1Q9NRV9 189 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 SPATA6Q9NWH7 488 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 CCDC39Q9UFE4 941 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 MRPS17Q9Y2R5 130 aaKnown RBP17.24■□□□□ 0.35
TUBB3-213ENST00000557262 DERAQ9Y315 318 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 CLIC4Q9Y696 253 aa17.24■□□□□ 0.35
TUBB3-213ENST00000557262 PIRO00625 290 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 PPEF2O14830 753 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 LAMTOR5O43504 91 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 VNN2O95498 520 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 ACOT2P49753 483 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 EPHB3P54753 998 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 DUSP4Q13115 394 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 PTPAQ15257 358 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 C9orf57Q5W0N0 161 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 ADALQ6DHV7 355 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 ARMCX5Q6P1M9 558 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 IRF7Q92985 503 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 CLDN23Q96B33 292 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 BORCS6Q96GS4 357 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 PGLYRP2Q96PD5 576 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 YIPF1Q9Y548 306 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 STYXL1Q9Y6J8 313 aa17.23■□□□□ 0.35
TUBB3-213ENST00000557262 WDR87Q6ZQQ6 2873 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
TUBB3-213ENST00000557262 NRG2O14511 850 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms