RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 PTPN14Q15678 1187 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 PSMD5Q16401 504 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 ELMSAN1Q6PJG2 1045 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 FRMD5Q7Z6J6 570 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 PPFIBP1Q86W92 1011 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 ZC3H3Q8IXZ2 948 aaKnown RBP13.71□□□□□ -0.21
APEX1-217ENST00000557181 MRPL43Q8N983 215 aaKnown RBP13.71□□□□□ -0.21
APEX1-217ENST00000557181 HPDLQ96IR7 371 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 B3GALT6Q96L58 329 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 CDCA3Q99618 268 aaPredicted RBP13.71□□□□□ -0.21
APEX1-217ENST00000557181 VN1R3Q9BXE9 311 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 DSEQ9UL01 958 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
APEX1-217ENST00000557181 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 KPNA7A9QM74 516 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 CYB561D2O14569 222 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 P4HA1P13674 534 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 FGFR3P22607 806 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 GTF2H1P32780 548 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 GCLMP48507 274 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 NDUFV1P49821 464 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 MXI1P50539 228 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 TNNC1P63316 161 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 DLG4P78352 724 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
APEX1-217ENST00000557181 CETN1Q12798 172 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 NCOA4Q13772 614 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 CAMK1Q14012 370 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 ZNF280DQ6N043 979 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 PRSS55Q6UWB4 352 aaPredicted RBP13.7□□□□□ -0.22
APEX1-217ENST00000557181 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 GLYCTKQ8IVS8 523 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 PLEKHO2Q8TD55 490 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 DUSP9Q99956 384 aaKnown RBP13.7□□□□□ -0.22
APEX1-217ENST00000557181 TMEM8AQ9HCN3 771 aa13.7□□□□□ -0.22
APEX1-217ENST00000557181 SYCE3A1L190 88 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 PER2O15055 1255 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 N4BP1O75113 896 aaKnown RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 TPM2P07951 284 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 ATICP31939 592 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 ZNF699Q32M78 642 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 KRT39Q6A163 491 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 ADGRD2Q7Z7M1 963 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 GPR65Q8IYL9 337 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 ANKRD20A12PQ8NF67 263 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 CNOT6LQ96LI5 555 aaKnown RBP13.69□□□□□ -0.22
APEX1-217ENST00000557181 MMS19Q96T76 1030 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.69□□□□□ -0.22
APEX1-217ENST00000557181 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 IRAK3Q9Y616 596 aa13.69□□□□□ -0.22
APEX1-217ENST00000557181 M0QZQ0 153 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 TYMPP19971 482 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 AARSP49588 968 aaKnown RBP eCLIP13.68□□□□□ -0.22
APEX1-217ENST00000557181 ARPP19P56211 112 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 MYL6P60660 151 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 CLDN10P78369 228 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 MYL7Q01449 175 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 DUSP6Q16828 381 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 ZACNQ401N2 412 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 ZNF667Q5HYK9 610 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 KIAA0319Q5VV43 1072 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 LLGL2Q6P1M3 1020 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 ZNF516Q92618 1163 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 KLHL5Q96PQ7 755 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 OXCT2Q9BYC2 517 aaPredicted RBP13.68□□□□□ -0.22
APEX1-217ENST00000557181 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
APEX1-217ENST00000557181 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 SIX4Q9UIU6 781 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
APEX1-217ENST00000557181 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
APEX1-217ENST00000557181 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 SCN1AP35498 2009 aa13.68□□□□□ -0.22
APEX1-217ENST00000557181 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
APEX1-217ENST00000557181 SPTLC1O15269 473 aa13.67□□□□□ -0.22
APEX1-217ENST00000557181 TEX28O15482 410 aa13.67□□□□□ -0.22
APEX1-217ENST00000557181 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
APEX1-217ENST00000557181 EFEMP2O95967 443 aa13.67□□□□□ -0.22
APEX1-217ENST00000557181 GLUD1P00367 558 aa13.67□□□□□ -0.22
APEX1-217ENST00000557181 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms