RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 RFXAPO00287 272 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 CTSAP10619 480 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 GTF2H1P32780 548 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
PCNX4-213ENST00000556907 WNT7BP56706 349 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.68■□□□□ 0.42
PCNX4-213ENST00000556907 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 CREBRFQ8IUR6 639 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 SLC35C1Q96A29 364 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 GUCD1Q96NT3 240 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 ZBP1Q9H171 429 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 NDST4Q9H3R1 872 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 PLXNA4Q9HCM2 1894 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 CHST7Q9NS84 486 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 MTCH2Q9Y6C9 303 aa17.68■□□□□ 0.42
PCNX4-213ENST00000556907 A0A1W2PQC6 194 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TULP1O00294 542 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 FSCN2O14926 492 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 SYN3O14994 580 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TEX33O43247 280 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TAF6P49848 677 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 CREMQ03060 361 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 CAMK1Q14012 370 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 SMC1AQ14683 1233 aaKnown RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 SV2CQ496J9 727 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 DCAF17Q5H9S7 520 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 FKBP15Q5T1M5 1219 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 C1orf127Q8N9H9 656 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 SUSD3Q96L08 255 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 ERGIC2Q96RQ1 377 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TCF25Q9BQ70 676 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 MTMR12Q9C0I1 747 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 ENTPD7Q9NQZ7 604 aa17.67■□□□□ 0.42
PCNX4-213ENST00000556907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 MRPL17Q9NRX2 175 aaKnown RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 COL4A4P53420 1690 aaPredicted RBP17.67■□□□□ 0.42
PCNX4-213ENST00000556907 TRANK1O15050 2925 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 LRRIQ3A6PVS8 624 aaPredicted RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 NCK2O43639 380 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 AFPP02771 609 aaKnown RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 ITGB3P05106 788 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 URODP06132 367 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 FOSL2P15408 326 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 IGFBP4P22692 258 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 DNAJB1P25685 340 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 GLUD2P49448 558 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 LILRA4P59901 499 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 DSG1Q02413 1049 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 UBXN1Q04323 297 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 MYO1EQ12965 1108 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 ADGRE1Q14246 886 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 MRPL43Q8N983 215 aaKnown RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 APPL2Q8NEU8 664 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 OR5B17Q8NGF7 314 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 MYLIPQ8WY64 445 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 CDCA3Q99618 268 aaPredicted RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 TTPALQ9BTX7 342 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 OXCT2Q9BYC2 517 aaPredicted RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 NSUN3Q9H649 340 aaKnown RBP17.66■□□□□ 0.42
PCNX4-213ENST00000556907 CACNG4Q9UBN1 327 aa17.66■□□□□ 0.42
PCNX4-213ENST00000556907 GTPBP10A4D1E9 387 aaKnown RBP17.65■□□□□ 0.42
PCNX4-213ENST00000556907 M0QZQ0 153 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 N4BP1O75113 896 aaKnown RBP17.65■□□□□ 0.42
PCNX4-213ENST00000556907 STAU1O95793 577 aaKnown RBP17.65■□□□□ 0.42
PCNX4-213ENST00000556907 C1RP00736 705 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 C4BPAP04003 597 aaKnown RBP17.65■□□□□ 0.42
PCNX4-213ENST00000556907 FGFR3P22607 806 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 ATICP31939 592 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 ERVFC1P60507 584 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 KCNH2Q12809 1159 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 TRPC3Q13507 836 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 ZACNQ401N2 412 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 FAM171A1Q5VUB5 890 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 TMC6Q7Z403 805 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 CXorf38Q8TB03 319 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 PLEKHO2Q8TD55 490 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 RABGGTAQ92696 567 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 POP1Q99575 1024 aaKnown RBP17.65■□□□□ 0.42
PCNX4-213ENST00000556907 VN1R3Q9BXE9 311 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 IMPACTQ9P2X3 320 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 DSEQ9UL01 958 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 AGAP1Q9UPQ3 857 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 SZT2Q5T011 3432 aa17.65■□□□□ 0.42
PCNX4-213ENST00000556907 F8W810 466 aa17.64■□□□□ 0.41
PCNX4-213ENST00000556907 PES1O00541 588 aaKnown RBP17.64■□□□□ 0.41
PCNX4-213ENST00000556907 PHACTR2O75167 634 aa17.64■□□□□ 0.41
PCNX4-213ENST00000556907 CXCL14O95715 111 aa17.64■□□□□ 0.41
PCNX4-213ENST00000556907 KRT19P08727 400 aa17.64■□□□□ 0.41
PCNX4-213ENST00000556907 TRIM49P0CI25 452 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms