RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 ZNF280DQ6N043 979 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 TXNDC11Q6PKC3 985 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 RNF19BQ6ZMZ0 732 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 LONP2Q86WA8 852 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 YAF2Q8IY57 180 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 NSUN7Q8NE18 718 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 TTC8Q8TAM2 541 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 CSGALNACT1Q8TDX6 532 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 DDX12PQ92771 950 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 KIFAP3Q92845 792 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 SUSD3Q96L08 255 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 TBC1D32Q96NH3 1257 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 ACAP3Q96P50 834 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 ACO2Q99798 780 aaKnown RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 TCHPQ9BT92 498 aa9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 DAXXQ9UER7 740 aaPredicted RBP9.88□□□□□ -0.83
HNRNPC-227ENST00000556897 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 A0A1W2PRU2 124 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 SPECC1L-ADORA2AF8WAN1 911 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 ABLIM1O14639 778 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CHADO15335 359 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 PAPSS2O95340 614 aaPredicted RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 OR52Z1P0C646 297 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CTHP32929 405 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CCT6AP40227 531 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 NPTX2P47972 431 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 MLLT6P55198 1093 aaPredicted RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 PEX3P56589 373 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 FCHO2Q0JRZ9 810 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 ANKRD1Q15327 319 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 ZNF174Q15697 407 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 STXBP5Q5T5C0 1151 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 HAUS3Q68CZ6 603 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 C1orf228Q6PIY5 440 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CEP68Q76N32 757 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 APPL2Q8NEU8 664 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 GTF3C6Q969F1 213 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 E2F7Q96AV8 911 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 MSANTD3Q96H12 275 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 ZFYVE19Q96K21 471 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 LRRC3BQ96PB8 259 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 PGLYRP2Q96PD5 576 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 TARS2Q9BW92 718 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 LRRC3Q9BY71 257 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 MRPL4Q9BYD3 311 aaKnown RBP9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 GPR88Q9GZN0 384 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 GTSE1Q9NYZ3 720 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 MAFFQ9ULX9 164 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 KIAA1024Q9UPX6 916 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 YIPF1Q9Y548 306 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 CEP295Q9C0D2 2601 aa9.87□□□□□ -0.83
HNRNPC-227ENST00000556897 MYBPHLA2RUH7 354 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 CITO14578 2027 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 FOXD2O60548 495 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 VNN2O95498 520 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 OR4Q2P0C623 313 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 MCF2P10911 925 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 PROZP22891 400 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 MARCKSP29966 332 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 GUCY1B3Q02153 619 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 YWHAHQ04917 246 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DUSP4Q13115 394 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DMP1Q13316 513 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 PON2Q15165 354 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 SF3A2Q15428 464 aaKnown RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 CCDC6Q16204 474 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 AASDHQ4L235 1098 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 SEZ6Q53EL9 994 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DGKKQ5KSL6 1271 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 N4BP2L1Q5TBK1 243 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 MPZL3Q6UWV2 235 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TAS1R3Q7RTX0 852 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 RALGPS2Q86X27 583 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TMC8Q8IU68 726 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DAW1Q8N136 415 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TMEM130Q8N3G9 435 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 BEST2Q8NFU1 509 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 FAM200AQ8TCP9 573 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DDX1Q92499 740 aaKnown RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 CRISPLD1Q9H336 500 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TMEM134Q9H6X4 195 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 C8orf33Q9H7E9 229 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 ARHGAP28Q9P2N2 729 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 ANKFY1Q9P2R3 1169 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TUBGCP4Q9UGJ1 667 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 RALYQ9UKM9 306 aaKnown RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 ANGPTL2Q9UKU9 493 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 TIMM13Q9Y5L4 95 aaPredicted RBP9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 SPAG17Q6Q759 2223 aa9.86□□□□□ -0.83
HNRNPC-227ENST00000556897 PDCD11Q14690 1871 aaKnown RBP9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
HNRNPC-227ENST00000556897 AXIN1O15169 862 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms