RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SYCP3Q8IZU3 236 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 BEST2Q8NFU1 509 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 ZNF461Q8TAF7 563 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 KCNN1Q92952 543 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 ZMAT2Q96NC0 199 aaKnown RBP7.96□□□□□ -1.13
SCFD1-222ENST00000556768 CLIC6Q96NY7 704 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 USP28Q96RU2 1077 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 OXCT2Q9BYC2 517 aaPredicted RBP7.96□□□□□ -1.13
SCFD1-222ENST00000556768 PANK2Q9BZ23 570 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 CFAP45Q9UL16 551 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 BACE2Q9Y5Z0 518 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 CDY1Q9Y6F8 540 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 MORC2Q9Y6X9 1032 aaPredicted RBP7.96□□□□□ -1.13
SCFD1-222ENST00000556768 CLUHO75153 1309 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 PPP6R2O75170 966 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 PIGRP01833 764 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 LRG1P02750 347 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 CXCL8P10145 99 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 CYP3A5P20815 502 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.14
SCFD1-222ENST00000556768 HOXA9P31269 272 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 PLA2G5P39877 138 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ARPP19P56211 112 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ALCAMQ13740 583 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ATL3Q6DD88 541 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF280DQ6N043 979 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF720Q7Z2F6 126 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 CCDC65Q8IXS2 484 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ELMOD1Q8N336 334 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 FBXL6Q8N531 539 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 IQUBQ8NA54 791 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 SLC7A14Q8TBB6 771 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 KCNG4Q8TDN1 519 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 POMGNT1Q8WZA1 660 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 HVCN1Q96D96 273 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 IRF2BPLQ9H1B7 796 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 CXCL16Q9H2A7 254 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 CUEDC2Q9H467 287 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 ST6GALNAC4Q9H4F1 302 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 KCNK12Q9HB15 430 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 MTRRQ9UBK8 725 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 RAPGEFL1Q9UHV5 662 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 FBXW11Q9UKB1 542 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 FBXL21Q9UKT6 434 aa7.96□□□□□ -1.14
SCFD1-222ENST00000556768 R3HCC1Q9Y3T6 440 aaKnown RBP7.96□□□□□ -1.14
SCFD1-222ENST00000556768 A0A0B4J269 797 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 TTC26A0AVF1 554 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 I3L4J1 428 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 ABLIM1O14639 778 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 GCNT3O95395 438 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 LDHAP00338 332 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 ASGR2P07307 311 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 FSHRP23945 695 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 NMT1P30419 496 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 BRCC3P46736 316 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 NASPP49321 788 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 POU5F1Q01860 360 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 YWHAHQ04917 246 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 CTXN3Q4LDR2 81 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 VARS2Q5ST30 1063 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 TPGS2Q68CL5 300 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 IQCEQ6IPM2 695 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 DSTYKQ6XUX3 929 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 USP49Q70CQ1 688 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 GET4Q7L5D6 327 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 GRASPQ7Z6J2 395 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 PDILTQ8N807 584 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 LINC00301Q8NCQ3 95 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 C18orf25Q96B23 403 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 ACCSQ96QU6 501 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 PYM1Q9BRP8 204 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 ASB7Q9H672 318 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 TMEM206Q9H813 350 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 AGO2Q9UKV8 859 aaKnown RBP7.95□□□□□ -1.14
SCFD1-222ENST00000556768 MAFFQ9ULX9 164 aa7.95□□□□□ -1.14
SCFD1-222ENST00000556768 LACTBL1A8MY62 500 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CCL16O15467 120 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 YEATS4O95619 227 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ZSCAN22P10073 491 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 LAMP2P13473 410 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CPB1P15086 417 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ATF2P15336 505 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ME1P48163 572 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 MARSP56192 900 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SOX4Q06945 474 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 TMEM132DQ14C87 1099 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ENOX2Q16206 610 aaKnown RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SWI5Q1ZZU3 235 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ZC2HC1CQ53FD0 456 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SLC8B1Q6J4K2 584 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ARMCX5Q6P1M9 558 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 SFR1Q86XK3 245 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 C3orf58Q8NDZ4 430 aa7.94□□□□□ -1.14
SCFD1-222ENST00000556768 ZNF707Q96C28 371 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-222ENST00000556768 CYP4F11Q9HBI6 524 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms