RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 FRMD4BQ9Y2L6 1034 aa5.38□□□□□ -1.55
PRPF39-210ENST00000556718 CCDC154A6NI56 674 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 IFRD1O00458 451 aaPredicted RBP5.37□□□□□ -1.55
PRPF39-210ENST00000556718 PMM2O15305 246 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 CREB3O43889 395 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 MYBP10242 640 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 EGR2P11161 476 aaPredicted RBP5.37□□□□□ -1.55
PRPF39-210ENST00000556718 MPLP40238 635 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 HTR3AP46098 478 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 CACNB3P54284 484 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 APBA1Q02410 837 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 MGAT5Q09328 741 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 LLGL1Q15334 1064 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 UBE3CQ15386 1083 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 KIAA0753Q2KHM9 967 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 CCDC157Q569K6 752 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 ZNF362Q5T0B9 420 aaPredicted RBP5.37□□□□□ -1.55
PRPF39-210ENST00000556718 NRG4Q8WWG1 115 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 NEU1Q99519 415 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 TMEM60Q9H2L4 133 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 PRDM12Q9H4Q4 367 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 INTUQ9ULD6 942 aa5.37□□□□□ -1.55
PRPF39-210ENST00000556718 CFAP20Q9Y6A4 193 aaKnown RBP5.37□□□□□ -1.55
PRPF39-210ENST00000556718 MARCH11A6NNE9 402 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 HTRA2O43464 458 aaPredicted RBP5.36□□□□□ -1.55
PRPF39-210ENST00000556718 TUSC2O75896 110 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 UBXN7O94888 489 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 ESRRBO95718 433 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 WASP42768 502 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 AK2P54819 239 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 RESTQ13127 1097 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 GALEQ14376 348 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 ERCC6LQ2NKX8 1250 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 C10orf62Q5T681 223 aaPredicted RBP5.36□□□□□ -1.55
PRPF39-210ENST00000556718 FAM102AQ5T9C2 384 aaPredicted RBP5.36□□□□□ -1.55
PRPF39-210ENST00000556718 ABHD17BQ5VST6 288 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 DRICH1Q6PGQ1 229 aaPredicted RBP5.36□□□□□ -1.55
PRPF39-210ENST00000556718 OVCH2Q7RTZ1 564 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 DAAM2Q86T65 1068 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 MORC1Q86VD1 984 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 LYSMD2Q8IV50 215 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 SLC41A1Q8IVJ1 513 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 SPICE1Q8N0Z3 855 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 SLC44A3Q8N4M1 653 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 PPP1R35Q8TAP8 253 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 MYD88Q99836 296 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 ARPC5LQ9BPX5 153 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 NLRC4Q9NPP4 1024 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 PHTF1Q9UMS5 762 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 DAAM1Q9Y4D1 1078 aa5.36□□□□□ -1.55
PRPF39-210ENST00000556718 USP15Q9Y4E8 981 aaPredicted RBP5.36□□□□□ -1.55
PRPF39-210ENST00000556718 GOLIM4O00461 696 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 MGEA5O60502 916 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 PQBP1O60828 265 aaKnown RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 FOSP01100 380 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 GSPT1P15170 499 aaKnown RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 HTR1BP28222 390 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 MCAMP43121 646 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 ZNF280AP59817 542 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 SCAPQ12770 1279 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 IFIT5Q13325 482 aaKnown RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 ANO6Q4KMQ2 910 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 EPHA10Q5JZY3 1008 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 TTC7BQ86TV6 843 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 ENAHQ8N8S7 591 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 FAM156AQ8NDB6 213 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 GJA10Q969M2 543 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 C7orf25Q9BPX7 421 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 RBM12Q9NTZ6 932 aaKnown RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 KLHL11Q9NVR0 708 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 POGKQ9P215 609 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 EVLQ9UI08 416 aaPredicted RBP5.35□□□□□ -1.55
PRPF39-210ENST00000556718 TAGLN3Q9UI15 199 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 LIMCH1Q9UPQ0 1083 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 CLCA2Q9UQC9 943 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 IPPQ9Y573 584 aa5.35□□□□□ -1.55
PRPF39-210ENST00000556718 CAPN8A6NHC0 703 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 SLC16A6O15403 523 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 MATN4O95460 622 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 ITGAMP11215 1152 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 ELLP55199 621 aaPredicted RBP5.34□□□□□ -1.55
PRPF39-210ENST00000556718 MPP3Q13368 585 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 NOMO1Q15155 1222 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 HSP90AB4PQ58FF6 505 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 RNF220Q5VTB9 566 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 CYB5RLQ6IPT4 315 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 EFCAB12Q6NXP0 572 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 NPNTQ6UXI9 565 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 BHLHA9Q7RTU4 235 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 SRLQ86TD4 932 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 DRC7Q8IY82 874 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 PARD3BQ8TEW8 1205 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 RGMAQ96B86 450 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 MTFMTQ96DP5 389 aaKnown RBP5.34□□□□□ -1.55
PRPF39-210ENST00000556718 CEP95Q96GE4 821 aa5.34□□□□□ -1.55
PRPF39-210ENST00000556718 CDK5RAP3Q96JB5 506 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms