RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 C9orf57Q5W0N0 161 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 OVOS1Q6IE37 1185 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 ARMCX5Q6P1M9 558 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 METTL23Q86XA0 190 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 SLC44A3Q8N4M1 653 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 CACTINQ8WUQ7 758 aaKnown RBP11.69□□□□□ -0.54
XRCC3-216ENST00000556682 FGF13Q92913 245 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
XRCC3-216ENST00000556682 IRF2BPLQ9H1B7 796 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 DPP3Q9NY33 737 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 DNMT3BQ9UBC3 853 aaKnown RBP11.69□□□□□ -0.54
XRCC3-216ENST00000556682 WNT16Q9UBV4 365 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
XRCC3-216ENST00000556682 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
XRCC3-216ENST00000556682 ANO9A1A5B4 782 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 TISP43B9A030 160 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 PIRO00625 290 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 ZNF197O14709 1029 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
XRCC3-216ENST00000556682 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
XRCC3-216ENST00000556682 RHOP08100 348 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 SRFP11831 508 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 GUCY2FP51841 1108 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 PTPN5P54829 565 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 NTHL1P78549 312 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 KCNA1Q09470 495 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 PLD1Q13393 1074 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 MYBPC2Q14324 1141 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 E2F4Q16254 413 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 LEMD2Q8NC56 503 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 SENP8Q96LD8 212 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 ZNF560Q96MR9 790 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 C7orf25Q9BPX7 421 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 FAM213AQ9BRX8 229 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 SMOC2Q9H3U7 446 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
XRCC3-216ENST00000556682 GDE1Q9NZC3 331 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 R3HCC1Q9Y3T6 440 aaKnown RBP11.68□□□□□ -0.54
XRCC3-216ENST00000556682 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 TIMM13Q9Y5L4 95 aaPredicted RBP11.68□□□□□ -0.54
XRCC3-216ENST00000556682 INSL5Q9Y5Q6 135 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 TECTAO75443 2155 aa11.68□□□□□ -0.54
XRCC3-216ENST00000556682 ANHXE9PGG2 379 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 EXTL3O43909 919 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 RFX1P22670 979 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 PNPLA4P41247 253 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 ALDH1A3P47895 512 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 TAF6P49848 677 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CLCN5P51795 746 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CASP5P51878 434 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 GPR17Q13304 367 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 HTR4Q13639 388 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 SURF1Q15526 300 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CNNM4Q6P4Q7 775 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 PDZD4Q76G19 769 aaPredicted RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 BRSK2Q8IWQ3 736 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 THEM5Q8N1Q8 247 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 GPD1LQ8N335 351 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 SAAL1Q96ER3 474 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 CORO1BQ9BR76 489 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 KIAA1586Q9HCI6 787 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 HCFC1R1Q9NWW0 138 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
XRCC3-216ENST00000556682 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 NUMBLQ9Y6R0 609 aa11.67□□□□□ -0.54
XRCC3-216ENST00000556682 PLXNA3P51805 1871 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 CITO14578 2027 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 PVALEFA0A1B0GWK0 134 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 STK25O00506 426 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 CYB561D2O14569 222 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 EIF3DO15371 548 aaKnown RBP eCLIP11.66□□□□□ -0.54
XRCC3-216ENST00000556682 MICAL2O94851 1124 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 SEC24AO95486 1093 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 PDGFBP01127 241 aaPredicted RBP11.66□□□□□ -0.54
XRCC3-216ENST00000556682 CYP11A1P05108 521 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 SNRPFP62306 86 aaKnown RBP11.66□□□□□ -0.54
XRCC3-216ENST00000556682 KRT85P78386 507 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 TWF1Q12792 350 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 SMARCB1Q12824 385 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 PKP1Q13835 747 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 SV2CQ496J9 727 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 FAM26FQ5R3K3 315 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 IER5LQ5T953 404 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 UNC13DQ70J99 1090 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 SIX5Q8N196 739 aa11.66□□□□□ -0.54
XRCC3-216ENST00000556682 FLCNQ8NFG4 579 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms