RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 GRPEL1Q9HAV7 217 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.44□□□□□ -0.267e-6■■■■■ 74.5
ABCD4-225ENST00000556517 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 DSEQ9UL01 958 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 SNX9Q9Y5X1 595 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 ANK1P16157 1881 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 A0A1W2PQC6 194 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 RFX1P22670 979 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 TBXAS1P24557 533 aaPredicted RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 PON1P27169 355 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 BMPR1AP36894 532 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 PBX2P40425 430 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 YWHAEP62258 255 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 LRMPQ12912 555 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 BMS1Q14692 1282 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 NR1I3Q14994 352 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 FNDC1Q4ZHG4 1894 aaPredicted RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 KIAA1841Q6NSI8 718 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 FUT10Q6P4F1 479 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 PPM1KQ8N3J5 372 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 APPL2Q8NEU8 664 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 CXorf38Q8TB03 319 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 ERGIC2Q96RQ1 377 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 NKX2-4Q9H2Z4 354 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 GDAP2Q9NXN4 497 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 APEX2Q9UBZ4 518 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 PUF60Q9UHX1 559 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 MTUS1Q9ULD2 1270 aa13.43□□□□□ -0.26
ABCD4-225ENST00000556517 YBX2Q9Y2T7 364 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
ABCD4-225ENST00000556517 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
ABCD4-225ENST00000556517 CYB561D2O14569 222 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 FGF18O76093 207 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 RB1P06400 928 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 SLC9A1P19634 815 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 MRE11P49959 708 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 MFAP3P55082 362 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 LRIT3Q3SXY7 679 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 ENOSF1Q7L5Y1 443 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 SUSD3Q96L08 255 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 C17orf80Q9BSJ5 609 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 FAM207AQ9NSI2 230 aaPredicted RBP13.42□□□□□ -0.26
ABCD4-225ENST00000556517 MARCH5Q9NX47 278 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 DAAM1Q9Y4D1 1078 aa13.42□□□□□ -0.26
ABCD4-225ENST00000556517 C5orf67F2Z3F1 127 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 F8W810 466 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 SYN3O14994 580 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 SPTLC1O15269 473 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TEX33O43247 280 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 ITGB1P05556 798 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TPM1P09493 284 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 BRCC3P46736 316 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
ABCD4-225ENST00000556517 GCNT1Q02742 428 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TAP1Q03518 808 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 CUL2Q13617 745 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TIGD5Q53EQ6 642 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 FAM171A1Q5VUB5 890 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 PDXDC1Q6P996 788 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 SCARA5Q6ZMJ2 495 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-225ENST00000556517 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 CACNA2D4Q7Z3S7 1137 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-225ENST00000556517 CEP57Q86XR8 500 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 ADGRF2Q8IZF7 708 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 KLHL23Q8NBE8 558 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 IQCDQ96DY2 449 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 SNX25Q9H3E2 840 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 FAM124BQ9H5Z6 455 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-225ENST00000556517 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 PCDHB8Q9UN66 801 aa13.41□□□□□ -0.26
ABCD4-225ENST00000556517 FSD2A1L4K1 749 aa13.4□□□□□ -0.26
ABCD4-225ENST00000556517 I3L4J1 428 aa13.4□□□□□ -0.26
ABCD4-225ENST00000556517 M0QZQ0 153 aa13.4□□□□□ -0.26
ABCD4-225ENST00000556517 URODP06132 367 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms