RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 LMBR1Q8WVP7 490 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 RMDN1Q96DB5 314 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC120Q96HB5 630 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 COX4I2Q96KJ9 171 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 NECTIN4Q96NY8 510 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 GPR20Q99678 358 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 TM9SF2Q99805 663 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 RNF41Q9H4P4 317 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 JMJD4Q9H9V9 463 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 PUF60Q9UHX1 559 aaKnown RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC171Q6TFL3 1326 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 UPK3BL1B0FP48 263 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CHURC1-FNTBB4DL54 471 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 UPK3BL2E5RIL1 263 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 KRT37O76014 449 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 FGF18O76093 207 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CD52P31358 61 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 RBM10P98175 930 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ITIH3Q06033 890 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 TRAF1Q13077 416 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 KCNC3Q14003 757 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 PAN2Q504Q3 1202 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ARSHQ5FYA8 562 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 SPOUT1Q5T280 376 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CES5AQ6NT32 575 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 MPZL3Q6UWV2 235 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 NLRC3Q7RTR2 1065 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 LSRQ86X29 649 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 TAB3Q8N5C8 712 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ESR2Q92731 530 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CASP10Q92851 521 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 SHDQ96IW2 340 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ALPK1Q96QP1 1244 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 SENP7Q9BQF6 1050 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 ADAM7Q9H2U9 754 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 KAT14Q9H8E8 782 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 AGO3Q9H9G7 860 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
ATXN3-239ENST00000556315 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 LZTS1Q9Y250 596 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 PCDHA1Q9Y5I3 950 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
ATXN3-239ENST00000556315 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 CACNA1AO00555 2505 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 BAZ2AQ9UIF9 1905 aaKnown RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 MBLAC1A4D2B0 266 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 RRN3P2A6NIE6 340 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 C2CD4DB7Z1M9 353 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 TNFRSF10CO14798 259 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ZBTB5O15062 677 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 FIBPO43427 364 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 DNAJA2O60884 412 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 SCG2P13521 617 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 NME1P15531 152 aaKnown RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 AOC1P19801 751 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 CCNFP41002 786 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 MTHFRP42898 656 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 KIR3DL1P43629 444 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 MRPS6P82932 125 aaKnown RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 PPFIA1Q13136 1202 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ANGPT1Q15389 498 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 MCMDC2Q4G0Z9 681 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ATAT1Q5SQI0 421 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 LCNL1Q6ZST4 164 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 IQCA1Q86XH1 822 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 THNSL1Q8IYQ7 743 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 NME8Q8N427 588 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 DTWD2Q8NBA8 298 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 IL31RAQ8NI17 732 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ZSCAN18Q8TBC5 510 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 LINC01599Q8WXQ3 324 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
ATXN3-239ENST00000556315 ANAPC16Q96DE5 110 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 DRC1Q96MC2 740 aa5.54□□□□□ -1.52
ATXN3-239ENST00000556315 INPP4AQ96PE3 977 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms