RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CTTNBP2NLQ9P2B4 639 aa4.74□□□□□ -1.65
SCFD1-218ENST00000556256 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 PPEF2O14830 753 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 ENDOD1O94919 500 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 DACT2Q5SW24 774 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 C16orf86Q6ZW13 317 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 KCNK18Q7Z418 384 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 CMIPQ8IY22 773 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 ZGPATQ8N5A5 531 aaKnown RBP4.73□□□□□ -1.65
SCFD1-218ENST00000556256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCFD1-218ENST00000556256 CCHCR1Q8TD31 782 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 TGFBRAP1Q8WUH2 860 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 QTRT1Q9BXR0 403 aaKnown RBP4.73□□□□□ -1.65
SCFD1-218ENST00000556256 QRSL1Q9H0R6 528 aaKnown RBP4.73□□□□□ -1.65
SCFD1-218ENST00000556256 SERGEFQ9UGK8 458 aa4.73□□□□□ -1.65
SCFD1-218ENST00000556256 CD1AP06126 327 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 HNRNPCP07910 306 aaKnown RBP eCLIP4.72□□□□□ -1.657e-6■□□□□ 10.8
SCFD1-218ENST00000556256 PPP3CBP16298 524 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 CERS1P27544 350 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 SLC6A4P31645 630 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 SESN3P58005 492 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 ATP8B2P98198 1209 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 ANO4Q32M45 955 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 SUPT20HL1Q3ZLR7 823 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 HOMER1Q86YM7 354 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 ADGRG5Q8IZF4 528 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 LEO1Q8WVC0 666 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-218ENST00000556256 RNPC3Q96LT9 517 aaKnown RBP4.72□□□□□ -1.65
SCFD1-218ENST00000556256 SH2D3AQ9BRG2 576 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 ADI1Q9BV57 179 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 ANLNQ9NQW6 1124 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 KLC4Q9NSK0 619 aa4.72□□□□□ -1.65
SCFD1-218ENST00000556256 H3BNC9 293 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 SUN1O94901 812 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 TTLL1O95922 423 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 TOP3BO95985 862 aaKnown RBP4.71□□□□□ -1.66
SCFD1-218ENST00000556256 MTHFD2P13995 350 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 BPIP17213 487 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 DDCP20711 480 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 NXPH1P58417 271 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 MALLQ13021 153 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 SLC18B1Q6NT16 456 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 CAMKK1Q8N5S9 505 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 NLGN4YQ8NFZ3 816 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-218ENST00000556256 ZSWIM4Q9H7M6 989 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 ELOVL5Q9NYP7 299 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 CDYLQ9Y232 598 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 NEU2Q9Y3R4 380 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 LRP12Q9Y561 859 aa4.71□□□□□ -1.66
SCFD1-218ENST00000556256 PPP6CO00743 305 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 URI1O94763 535 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 AGFG2O95081 481 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 CCT8P50990 548 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ANXA11P50995 505 aaKnown RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 POLGP54098 1239 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 CREMQ03060 361 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ITIH3Q06033 890 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ZNF844Q08AG5 666 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 MGAT2Q10469 447 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 B3GALNT2Q8NCR0 500 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 NSUN7Q8NE18 718 aaKnown RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 SNX19Q92543 992 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 LRIG1Q96JA1 1093 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ORAI2Q96SN7 254 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 SPRTNQ9H040 489 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 MTMR4Q9NYA4 1195 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ZBTB21Q9ULJ3 1066 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 ADGRA2Q96PE1 1338 aa4.7□□□□□ -1.66
SCFD1-218ENST00000556256 MYBBP1AQ9BQG0 1328 aaKnown RBP4.7□□□□□ -1.66
SCFD1-218ENST00000556256 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 NEMP1O14524 444 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 INSIG1O15503 277 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 HAUS5O94927 633 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 NR2F6P10588 404 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 CYP2D6P10635 497 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 DRD4P21917 467 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 NR4A2P43354 598 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 ID4P47928 161 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 MC2RQ01718 297 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 RAPGEF1Q13905 1077 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 SF3A1Q15459 793 aaKnown RBP4.69□□□□□ -1.66
SCFD1-218ENST00000556256 UTP14CQ5TAP6 766 aaKnown RBP4.69□□□□□ -1.66
SCFD1-218ENST00000556256 SLC2A7Q6PXP3 512 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 SAMD14Q8IZD0 417 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-218ENST00000556256 OR2I1PQ8NGU4 316 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 LMBR1Q8WVP7 490 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 RFKQ969G6 155 aa4.69□□□□□ -1.66
SCFD1-218ENST00000556256 C11orf54Q9H0W9 315 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-218ENST00000556256 ULK1O75385 1050 aa4.68□□□□□ -1.66
SCFD1-218ENST00000556256 NHLRC4P0CG21 123 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-218ENST00000556256 SNHG28P0DPA3 235 aa4.68□□□□□ -1.66
SCFD1-218ENST00000556256 SFPQP23246 707 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCFD1-218ENST00000556256 HLXQ14774 488 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-218ENST00000556256 PROSER3Q2NL68 480 aa4.68□□□□□ -1.66
SCFD1-218ENST00000556256 ZNF260Q3ZCT1 412 aa4.68□□□□□ -1.66
SCFD1-218ENST00000556256 PREPLQ4J6C6 727 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-218ENST00000556256 DALRD3Q5D0E6 543 aaKnown RBP4.68□□□□□ -1.66
SCFD1-218ENST00000556256 TOR2AQ5JU69 321 aa4.68□□□□□ -1.66
SCFD1-218ENST00000556256 TMPRSS9Q7Z410 1059 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms