RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 POMKQ9H5K3 350 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 FBXL5Q9UKA1 691 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 CCDC195A0A1B0GUA6 201 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 EXOC3O60645 756 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 KIF20AO95235 890 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 PAX3P23760 479 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 POLR2BP30876 1174 aaKnown RBP16.41■□□□□ 0.22
ACTN1-217ENST00000556203 TAF6P49848 677 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 ARPP19P56211 112 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 YWHAHQ04917 246 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-217ENST00000556203 SURF1Q15526 300 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 SLC8B1Q6J4K2 584 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 USP37Q86T82 979 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 SENP8Q96LD8 212 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 ZNF560Q96MR9 790 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 ZDHHC7Q9NXF8 308 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 MAPK8IP1Q9UQF2 711 aa16.41■□□□□ 0.22
ACTN1-217ENST00000556203 PDCD11Q14690 1871 aaKnown RBP16.41■□□□□ 0.22
ACTN1-217ENST00000556203 ZMYND10O75800 440 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 OAZ2O95190 189 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ITGB3P05106 788 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 KRT19P08727 400 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 DLATP10515 647 aaKnown RBP16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ODC1P11926 461 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 TYMPP19971 482 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-217ENST00000556203 PNPLA4P41247 253 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ROR1Q01973 937 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 PSMD6Q15008 389 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 C15orf39Q6ZRI6 1047 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 CSGALNACT2Q8N6G5 542 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-217ENST00000556203 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ANKRD36BP1Q96IX9 119 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 INTS13Q9NVM9 706 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 HOOK1Q9UJC3 728 aaKnown RBP16.4■□□□□ 0.22
ACTN1-217ENST00000556203 ITGA11Q9UKX5 1188 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 AGAP1Q9UPQ3 857 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 VWA8A3KMH1 1905 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
ACTN1-217ENST00000556203 WDR27A2RRH5 827 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 LOC730098B7Z3J9 87 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 PDXKO00764 312 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 CALUO43852 315 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-217ENST00000556203 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SMC2O95347 1197 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 TNNC2P02585 160 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 NR3C1P04150 777 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 C8AP07357 584 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 RBP5P82980 135 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 DUOXA2Q1HG44 320 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SV2CQ496J9 727 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 PPM1LQ5SGD2 360 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 OVOS1Q6IE37 1185 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SLC9A9Q8IVB4 645 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SMYD4Q8IYR2 804 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-217ENST00000556203 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SLC7A14Q8TBB6 771 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SMG7Q92540 1137 aaKnown RBP16.39■□□□□ 0.21
ACTN1-217ENST00000556203 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-217ENST00000556203 BORCS6Q96GS4 357 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 GSDMAQ96QA5 445 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 SIX4Q9UIU6 781 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 PCDHA5Q9Y5H7 936 aa16.39■□□□□ 0.21
ACTN1-217ENST00000556203 ARHGEF37A1IGU5 675 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 CYB561D2O14569 222 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
ACTN1-217ENST00000556203 PAPLNO95428 1278 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 TNNI1P19237 187 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 CYP26C1Q6V0L0 522 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 CCDC149Q6ZUS6 474 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 GUF1Q8N442 669 aaKnown RBP16.38■□□□□ 0.21
ACTN1-217ENST00000556203 LRRC52Q8N7C0 313 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 SMARCE1Q969G3 411 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 MFSD14AQ96MC6 490 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 RHOBTB2Q9BYZ6 727 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 PRKD2Q9BZL6 878 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 PIDD1Q9HB75 910 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 DSEQ9UL01 958 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 TRAF3IP3Q9Y228 551 aa16.38■□□□□ 0.21
ACTN1-217ENST00000556203 R3HCC1Q9Y3T6 440 aaKnown RBP16.38■□□□□ 0.21
ACTN1-217ENST00000556203 PLXNA3P51805 1871 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 OR6C75A6NL08 312 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms