RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 C11orf63Q6NUN7 778 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 SLC27A1Q6PCB7 646 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 CATSPER4Q7RTX7 472 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 C1orf127Q8N9H9 656 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 SPATA4Q8NEY3 305 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 DNAJB3Q8WWF6 145 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 HES6Q96HZ4 224 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 ABHD8Q96I13 439 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 PSMB7Q99436 277 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 MTG1Q9BT17 334 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-205ENST00000556096 VRTNQ9H8Y1 702 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 PLEKHA5Q9HAU0 1116 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 CTTNBP2NLQ9P2B4 639 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 UVRAGQ9P2Y5 699 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 SIX4Q9UIU6 781 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 PACSIN2Q9UNF0 486 aaPredicted RBP15.73■□□□□ 0.11
VPS33B-205ENST00000556096 C2CD2Q9Y426 696 aa15.73■□□□□ 0.11
VPS33B-205ENST00000556096 FGFR4P22455 802 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 GNA15P30679 374 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 CLCN6P51797 869 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 TMEM62Q0P6H9 643 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 BRD3Q15059 726 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 NOTUMQ6P988 496 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 CXorf38Q8TB03 319 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 TRIM11Q96F44 468 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 OSMRQ99650 979 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 SELENOOQ9BVL4 669 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 CCDC94Q9BW85 323 aaPredicted RBP15.72■□□□□ 0.11
VPS33B-205ENST00000556096 SPC25Q9HBM1 224 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 DERAQ9Y315 318 aa15.72■□□□□ 0.11
VPS33B-205ENST00000556096 CLSTN1O94985 981 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 MYBL1P10243 752 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 CRYBB1P53674 252 aaPredicted RBP15.71■□□□□ 0.11
VPS33B-205ENST00000556096 CENPCQ03188 943 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 TMEM132DQ14C87 1099 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 GNASQ5JWF2 1037 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 PPP1R13LQ8WUF5 828 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 ZNF653Q96CK0 615 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 GOLPH3Q9H4A6 298 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 XPNPEP3Q9NQH7 507 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 AVENQ9NQS1 362 aaPredicted RBP15.71■□□□□ 0.11
VPS33B-205ENST00000556096 CISHQ9NSE2 258 aa15.71■□□□□ 0.11
VPS33B-205ENST00000556096 DDX20Q9UHI6 824 aaKnown RBP15.71■□□□□ 0.11
VPS33B-205ENST00000556096 TRIP12Q14669 1992 aaPredicted RBP15.71■□□□□ 0.11
VPS33B-205ENST00000556096 TARSL2A2RTX5 802 aaKnown RBP15.71■□□□□ 0.1
VPS33B-205ENST00000556096 CCDC151A5D8V7 595 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 KCNK3O14649 394 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ADAMTS4O75173 837 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 NPTXRO95502 500 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 STAU1O95793 577 aaKnown RBP15.71■□□□□ 0.1
VPS33B-205ENST00000556096 CALCAP01258 141 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 RHOXF2BP0C7M4 288 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ASPAP45381 313 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ZNF200P98182 395 aaPredicted RBP15.71■□□□□ 0.1
VPS33B-205ENST00000556096 SNX17Q15036 470 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ZNF667Q5HYK9 610 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 TAF2Q6P1X5 1199 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 MCOLN2Q8IZK6 566 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ACTRT1Q8TDG2 376 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 VCPIP1Q96JH7 1222 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 RPS6KC1Q96S38 1066 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 RHOXF2Q9BQY4 288 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 BCO2Q9BYV7 579 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 PAK6Q9NQU5 681 aaPredicted RBP15.71■□□□□ 0.1
VPS33B-205ENST00000556096 ITGA11Q9UKX5 1188 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 GINS2Q9Y248 185 aa15.71■□□□□ 0.1
VPS33B-205ENST00000556096 SCN10AQ9Y5Y9 1956 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 CCDC85CA6NKD9 419 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 ITGB3P05106 788 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 KRT19P08727 400 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 C2orf54Q08AI8 447 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 LHX8Q68G74 356 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 WDR93Q6P2C0 686 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 HNRNPLLQ8WVV9 542 aaKnown RBP15.7■□□□□ 0.1
VPS33B-205ENST00000556096 ZNF606Q8WXB4 792 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 CYFIP2Q96F07 1278 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 MS4A14Q96JA4 679 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 FAM124BQ9H5Z6 455 aaPredicted RBP15.7■□□□□ 0.1
VPS33B-205ENST00000556096 CNOT8Q9UFF9 292 aaKnown RBP15.7■□□□□ 0.1
VPS33B-205ENST00000556096 ALG6Q9Y672 507 aa15.7■□□□□ 0.1
VPS33B-205ENST00000556096 MIF4GDA9UHW6 222 aaKnown RBP15.69■□□□□ 0.1
VPS33B-205ENST00000556096 DDX3YO15523 660 aaKnown RBP15.69■□□□□ 0.1
VPS33B-205ENST00000556096 THAP12O43422 761 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 MCM3P25205 808 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 NSFP46459 744 aaKnown RBP15.69■□□□□ 0.1
VPS33B-205ENST00000556096 NOMO3P69849 1222 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 RBP5P82980 135 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 CCDC70Q6NSX1 233 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 TMCO3Q6UWJ1 677 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 PHF13Q86YI8 300 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-205ENST00000556096 RASGEF1CQ8N431 466 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 ZNF564Q8TBZ8 553 aaPredicted RBP15.69■□□□□ 0.1
VPS33B-205ENST00000556096 PNKPQ96T60 521 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 NUP85Q9BW27 656 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 CYP3A43Q9HB55 503 aa15.69■□□□□ 0.1
VPS33B-205ENST00000556096 WEE2P0C1S8 567 aa15.68■□□□□ 0.1
VPS33B-205ENST00000556096 P4HA1P13674 534 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms