RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 DNAJC7Q99615 494 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 MXD3Q9BW11 206 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 CHMP4AQ9BY43 222 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 VPS33BQ9H267 617 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 SPC25Q9HBM1 224 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 MYOZ2Q9NPC6 264 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 FANCLQ9NW38 375 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 IFT57Q9NWB7 429 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 BTBD7Q9P203 1132 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM184BQ9ULE4 1060 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 NIP7Q9Y221 180 aaKnown RBP eCLIP3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 NOP58Q9Y2X3 529 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 GVINP1Q7Z2Y8 2422 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 SPEF2Q9C093 1822 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 SPTBN2O15020 2390 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 CEMIPQ8WUJ3 1361 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 TCRBV5S4A2TA0A5A2 114 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM221BA6H8Z2 402 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 FYB1O15117 783 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 ADCY3O60266 1144 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 SOD2P04179 222 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 NR4A1P22736 598 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 AOAHP28039 575 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 ADCY7P51828 1080 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 PRMT2P55345 433 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 GPR85P60893 370 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 HERVK_113P62684 666 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 UBXN2AP68543 259 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 MOGSQ13724 837 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 FXNQ16595 210 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 MTERF2Q49AM1 385 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 KCNV1Q6PIU1 500 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 USP53Q70EK8 1073 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 ARMC9Q7Z3E5 817 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 HOMER1Q86YM7 354 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 RPGRQ92834 1020 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 BADQ92934 168 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 OPTNQ96CV9 577 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 ZNF496Q96IT1 587 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 RNPC3Q96LT9 517 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 EPN3Q9H201 632 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 OR10A5Q9H207 317 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 KCNH6Q9H252 994 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 SLC52A2Q9HAB3 445 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 RIC8BQ9NVN3 520 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 SRPK3Q9UPE1 567 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 VWA7Q9Y334 891 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 CTDP1Q9Y5B0 961 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 PCDHAC2Q9Y5I4 1007 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 COL4A3BPQ9Y5P4 624 aa3.81□□□□□ -1.8
EFCAB11-210ENST00000556078 TENM4Q6N022 2769 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 UBN2Q6ZU65 1347 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 CACNA1HO95180 2353 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 CCL15-CCL14A0A0B4J2E2 113 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 GOLGA6L6A8MZA4 724 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 BTBD19C9JJ37 291 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 WNT10BO00744 389 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 PDPK1O15530 556 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 KLF4O43474 513 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 MAFO75444 373 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 MPIG6BO95866 241 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 U2AF1L5P0DN76 240 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 RPS12P25398 132 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 TNNT2P45379 298 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 PPP2R2AP63151 447 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 U2AF1Q01081 240 aaKnown RBP eCLIP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 SERINC3Q13530 473 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 ARHGEF6Q15052 776 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 ELAVL1Q15717 326 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 CCL15Q16663 113 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 GRAMD4Q6IC98 578 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 HDGFL2Q7Z4V5 671 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 BEND2Q8NDZ0 799 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 GPATCH3Q96I76 525 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 IER2Q9BTL4 223 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 AMNQ9BXJ7 453 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 SLC6A15Q9H2J7 730 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 PRDM13Q9H4Q3 707 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 POLLQ9UGP5 575 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 PFDN2Q9UHV9 154 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 ATG2AQ2TAZ0 1938 aa3.8□□□□□ -1.8
EFCAB11-210ENST00000556078 PHIPQ8WWQ0 1821 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 TEP1Q99973 2627 aaKnown RBP3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 ERC2O15083 957 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 KCNQ3O43525 872 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 HSP90AB1P08238 724 aaKnown RBP3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 CNGA1P29973 690 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 FLT3LGP49771 235 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 STAT5BP51692 787 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 MAPK7Q13164 816 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 EIF4A2Q14240 407 aaKnown RBP3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 KIF22Q14807 665 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 DDR2Q16832 855 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 NAIF1Q69YI7 327 aaPredicted RBP3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 OTUD7BQ6GQQ9 843 aa3.79□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM111BQ6SJ93 734 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms