RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TRIM21P19474 475 aaKnown RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 PBX3P40426 434 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 AARSP49588 968 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-214ENST00000556063 LILRA4P59901 499 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 MYL6P60660 151 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 TNNC1P63316 161 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 CREMQ03060 361 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 ZNF699Q32M78 642 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 USP41Q3LFD5 358 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 VWA3BQ502W6 1294 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 HSP90AA4PQ58FG1 418 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 ZNF667Q5HYK9 610 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 C1orf220Q5T0J3 134 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 FAM171A1Q5VUB5 890 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 C15orf39Q6ZRI6 1047 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 DPH6Q7L8W6 267 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 LUZP1Q86V48 1076 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 VPS52Q8N1B4 723 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 SPATA18Q8TC71 538 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 HASPINQ8TF76 798 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 RABGGTAQ92696 567 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 FAXDC2Q96IV6 333 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 SUSD3Q96L08 255 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 SENP8Q96LD8 212 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 FAM81BQ96LP2 452 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 PAAF1Q9BRP4 392 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 TTPALQ9BTX7 342 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 NDST4Q9H3R1 872 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 CERS4Q9HA82 394 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 NGRNQ9NPE2 291 aaKnown RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-214ENST00000556063 MARCH5Q9NX47 278 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 RAB20Q9NX57 234 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 CACNG4Q9UBN1 327 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 LIMA1Q9UHB6 759 aaKnown RBP8.21□□□□□ -1.1
TDP1-214ENST00000556063 SIX4Q9UIU6 781 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 COQ4Q9Y3A0 265 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 KIAA1671Q9BY89 1806 aa8.21□□□□□ -1.1
TDP1-214ENST00000556063 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 H7C4K7 107 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 CYB561D2O14569 222 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 ASS1P00966 412 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 SERPINC1P01008 464 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 TPM3P06753 285 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TYMPP19971 482 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 CA8P35219 290 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 BRCC3P46736 316 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 GLUD2P49448 558 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 COPB1P53618 953 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 YWHAEP62258 255 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 SMC1AQ14683 1233 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 KRT31Q15323 416 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 WDR72Q3MJ13 1102 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TIGD5Q53EQ6 642 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 GBP6Q6ZN66 633 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 ANKS3Q6ZW76 656 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TMEM173Q86WV6 379 aaPredicted RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 CEP57Q86XR8 500 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 THEM5Q8N1Q8 247 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TMEM86AQ8N2M4 240 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TTC39CQ8N584 583 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TOP6BLQ8N6T0 577 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 SPPL3Q8TCT6 385 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TAS1R2Q8TE23 839 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 NT5C1BQ96P26 610 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 MMS19Q96T76 1030 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 GAS2L1Q99501 681 aaPredicted RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 TCF25Q9BQ70 676 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 OXCT2Q9BYC2 517 aaPredicted RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 ALG13Q9NP73 1137 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 ENTPD7Q9NQZ7 604 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 MRPL17Q9NRX2 175 aaKnown RBP8.2□□□□□ -1.1
TDP1-214ENST00000556063 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 TAB2Q9NYJ8 693 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 LMCD1Q9NZU5 365 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 SNX9Q9Y5X1 595 aa8.2□□□□□ -1.1
TDP1-214ENST00000556063 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 FSD2A1L4K1 749 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 LGALS16A8MUM7 142 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 M0QZQ0 153 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 SOX1O00570 391 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 PPEF2O14830 753 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 GRM6O15303 877 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 VNN1O95497 513 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CXCL14O95715 111 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 CTSAP10619 480 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 FGFR3P22607 806 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 TBXAS1P24557 533 aaPredicted RBP8.19□□□□□ -1.1
TDP1-214ENST00000556063 LHX1P48742 406 aa8.19□□□□□ -1.1
TDP1-214ENST00000556063 NOP14P78316 857 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms