RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PLS3P13797 630 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 LRPAP1P30533 357 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MCM4P33991 863 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TNFSF9P41273 254 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GUCY2FP51841 1108 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ATP2C1P98194 919 aaPredicted RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NOLC1Q14978 699 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TEAD2Q15562 447 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RSPO4Q2I0M5 234 aaPredicted RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZNF280DQ6N043 979 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZPBP2Q6X784 338 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PDZD4Q76G19 769 aaPredicted RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SYT2Q8N9I0 419 aaPredicted RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 BORCS6Q96GS4 357 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TCHPQ9BT92 498 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 BRD9Q9H8M2 597 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ANKFY1Q9P2R3 1169 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NDRG2Q9UN36 371 aaKnown RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TIMM13Q9Y5L4 95 aaPredicted RBP15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 STK24Q9Y6E0 443 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ACACBO00763 2458 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 OBSL1O75147 1896 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 LAD1O00515 517 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZNF197O14709 1029 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CHRNB1P11230 501 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PSMC3P17980 439 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GDI1P31150 447 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 HOXC13P31276 330 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TMEM119Q4V9L6 283 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 STXBP5Q5T5C0 1151 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SLC39A4Q6P5W5 647 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MFSD6LQ8IWD5 586 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TTC9BQ8N6N2 239 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZSCAN18Q8TBC5 510 aaPredicted RBP15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ATRIPQ8WXE1 791 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZSCAN31Q96LW9 406 aaPredicted RBP15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TIPINQ9BVW5 301 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MAFFQ9ULX9 164 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 YIPF1Q9Y548 306 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CACNA1BQ00975 2339 aa15.66■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RALGAPA1Q6GYQ0 2036 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ENOX2Q16206 610 aaKnown RBP15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DTHD1Q6ZMT9 781 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GAREM2Q75VX8 874 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 APPL2Q8NEU8 664 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZNF512Q96ME7 567 aaPredicted RBP15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TMEM209Q96SK2 561 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 FIZ1Q96SL8 496 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PLIN2Q99541 437 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RAB34Q9BZG1 259 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 C2orf42Q9NWW7 574 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PIAS3Q9Y6X2 628 aa15.65■□□□□ 0.1
CHMP4BP1-201ENST00000556017 HEPACAM2A8MVW5 462 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LACTBL1A8MY62 500 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 NCAM2O15394 837 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CLTAP09496 248 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MYL4P12829 197 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ATXN1P54253 815 aaKnown RBP15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 DMWDQ09019 674 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 FCHO2Q0JRZ9 810 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 DUSP4Q13115 394 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GNL2Q13823 731 aaKnown RBP15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CYP4A22Q5TCH4 519 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 FAM184AQ8NB25 1140 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 IRF7Q92985 503 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PGLYRP2Q96PD5 576 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 LMAN1LQ9HAT1 526 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PLEKHA5Q9HAU0 1116 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 ASAH2Q9NR71 780 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 NCDNQ9UBB6 729 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CHD8Q9HCK8 2581 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 EML5Q05BV3 1969 aa15.64■□□□□ 0.09
CHMP4BP1-201ENST00000556017 TCHHQ07283 1943 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 A0A1W2PRU2 124 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MTMR11A4FU01 709 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MAN2B1O00754 1011 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CLDN3O15551 220 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PIGRP01833 764 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 PLA2G4BP0C869 781 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CPB1P15086 417 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CYP3A5P20815 502 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CCNE1P24864 410 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SOX9P48436 509 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 MLLT6P55198 1093 aaPredicted RBP15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 SATB1Q01826 763 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 YWHAHQ04917 246 aaPredicted RBP15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GPR17Q13304 367 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 IQCEQ6IPM2 695 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 CENPPQ6IPU0 288 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 TXNDC11Q6PKC3 985 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 HAUS6Q7Z4H7 955 aa15.63■□□□□ 0.09
CHMP4BP1-201ENST00000556017 GPIHBP1Q8IV16 184 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms