RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	EFCAB13	Q8IY85	973 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	EHBP1	Q8NDI1	1231 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	GSTCD	Q8NEC7	633 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	LMO3	Q8TAP4	145 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	IQCD	Q96DY2	449 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	FAXDC2	Q96IV6	333 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	PLCB1	Q9NQ66	1216 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	PARP2	Q9UGN5	583 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	SIK3	Q9Y2K2	1263 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	DAAM1	Q9Y4D1	1078 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	PLXNA4	Q9HCM2	1894 aa		12.2	□□□□□ -0.46
RAD51B-222	ENST00000555907	PTPRJ	Q12913	1337 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	HOXA2	O43364	376 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	XPOT	O43592	962 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	TBX10	O75333	385 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	OFD1	O75665	1012 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	TNNC2	P02585	160 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	NDUFV1	P49821	464 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	MXI1	P50539	228 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	TMEM132D	Q14C87	1099 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	EXOC3L4	Q17RC7	722 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	FIGN	Q5HY92	759 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	OR5B17	Q8NGF7	314 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	CXorf38	Q8TB03	319 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	ANP32B	Q92688	251 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	PBXIP1	Q96AQ6	731 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	FAM212A	Q96EL1	285 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	ANKRD36BP1	Q96IX9	119 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	ZMAT2	Q96NC0	199 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	PPP1R10	Q96QC0	940 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	NUP58	Q9BVL2	599 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	PLVAP	Q9BX97	442 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	EDEM3	Q9BZQ6	932 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	LMAN2L	Q9H0V9	348 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	KCNH6	Q9H252	994 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	RSAD1	Q9HA92	442 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	ALG13	Q9NP73	1137 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	SLC38A7	Q9NVC3	462 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	KANSL3	Q9P2N6	904 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	UBQLN1	Q9UMX0	589 aa	Known RBP	12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	TECTA	O75443	2155 aa		12.19	□□□□□ -0.46
RAD51B-222	ENST00000555907	CIT	O14578	2027 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TMEM221	A6NGB7	291 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	ARL5C	A6NH57	179 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TBKBP1	A7MCY6	615 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	MEIS3P2	A8K0S8	358 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907		M0R296	226 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PES1	O00541	588 aa	Known RBP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PTGES	O14684	152 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	VNN1	O95497	513 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	STAU1	O95793	577 aa	Known RBP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TH	P07101	528 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TMEM191B	P0C7N4	346 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PAX3	P23760	479 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PON1	P27169	355 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	LRPAP1	P30533	357 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TFAM	Q00059	246 aa	Known RBP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	SYCP1	Q15431	976 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	NAB2	Q15742	525 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	SMAD2	Q15796	467 aa	Known RBP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TDRD10	Q5VZ19	366 aa	Known RBP	12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	SPECC1L	Q69YQ0	1117 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	GLB1L	Q6UWU2	654 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	FBXL13	Q8NEE6	735 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	BEST2	Q8NFU1	509 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	TAF4B	Q92750	862 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	LPP	Q93052	612 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	KIF12	Q96FN5	646 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PDLIM2	Q96JY6	352 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	GAD1	Q99259	594 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	APOL6	Q9BWW8	343 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	CXCL16	Q9H2A7	254 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	VRTN	Q9H8Y1	702 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	RNF19A	Q9NV58	838 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	RAB20	Q9NX57	234 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	MIOS	Q9NXC5	875 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	DPP3	Q9NY33	737 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	KLK14	Q9P0G3	267 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	CD207	Q9UJ71	328 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	FBXL5	Q9UKA1	691 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	ITGA11	Q9UKX5	1188 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	PLAGL2	Q9UPG8	496 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.18	□□□□□ -0.46	5e-7	■■■■□ 22.4
RAD51B-222	ENST00000555907	WDFY4	Q6ZS81	3184 aa		12.18	□□□□□ -0.46
RAD51B-222	ENST00000555907	ANK1	P16157	1881 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	KMT2E	Q8IZD2	1858 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	ANO9	A1A5B4	782 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	CST3	P01034	146 aa	Predicted RBP	12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	NFIC	P08651	508 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	ATIC	P31939	592 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	RPL9	P32969	192 aa	Known RBP	12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	RBP5	P82980	135 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	MYL7	Q01449	175 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	TBX2	Q13207	712 aa	Predicted RBP	12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	SGSM1	Q2NKQ1	1148 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	NOMO2	Q5JPE7	1267 aa		12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	SPOUT1	Q5T280	376 aa	Known RBP	12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	RBM23	Q86U06	439 aa	Known RBP	12.17	□□□□□ -0.46
RAD51B-222	ENST00000555907	SUGP1	Q8IWZ8	645 aa	Known RBP	12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms