RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 MYBPC2Q14324 1141 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 IQCEQ6IPM2 695 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 PDZD4Q76G19 769 aaPredicted RBP13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 ZNF720Q7Z2F6 126 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 BORCS6Q96GS4 357 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 STRA6Q9BX79 667 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 CLIC4Q9Y696 253 aa13.79□□□□□ -0.2
HNRNPC-221ENST00000555883 NOTCH4Q99466 2003 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 CYP11A1P05108 521 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 CPB1P15086 417 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 CEBPBP17676 345 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 GAP43P17677 238 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ARPP19P56211 112 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 LILRA4P59901 499 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 SPAG1Q07617 926 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 GPR17Q13304 367 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 POSTNQ15063 836 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 MLF2Q15773 248 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 RNF19BQ6ZMZ0 732 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ASCL5Q7RTU5 278 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 USP37Q86T82 979 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 DNASE1L2Q92874 299 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ZNF512Q96ME7 567 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 CORO1BQ9BR76 489 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 TRPV4Q9HBA0 871 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 TRPV5Q9NQA5 729 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
HNRNPC-221ENST00000555883 PIRO00625 290 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ODC1P11926 461 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 FCARP24071 287 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 NMT1P30419 496 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 TWF1Q12792 350 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ALCAMQ13740 583 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 TMEM132DQ14C87 1099 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ADALQ6DHV7 355 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 OVOS1Q6IE37 1185 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 JADE1Q6IE81 842 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 DSTYKQ6XUX3 929 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 SV2BQ7L1I2 683 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ING5Q8WYH8 240 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 MCRS1Q96EZ8 462 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ASB16Q96NS5 453 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 NELL2Q99435 816 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 KXD1Q9BQD3 176 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ZHX3Q9H4I2 956 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ASAH2Q9NR71 780 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 CEP72Q9P209 647 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 DSEQ9UL01 958 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 ASB3Q9Y575 518 aa13.77□□□□□ -0.21
HNRNPC-221ENST00000555883 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 ANKRD63C9JTQ0 380 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 IL18RAPO95256 599 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 VNN2O95498 520 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 DCNP07585 359 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 NFICP08651 508 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 CCR2P41597 374 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SMARCB1Q12824 385 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SNW1Q13573 536 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SLC39A14Q15043 492 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 ZC2HC1CQ53FD0 456 aaPredicted RBP13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SMARCD2Q92925 531 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 E2F7Q96AV8 911 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 SENP8Q96LD8 212 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 ZFP14Q9HCL3 533 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 EXOC7Q9UPT5 735 aa13.76□□□□□ -0.21
HNRNPC-221ENST00000555883 MOSPD3O75425 235 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 FGF19O95750 216 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 GLULP15104 373 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 ADSSP30520 456 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 ACOT2P49753 483 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 MLLT6P55198 1093 aaPredicted RBP13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 ZNF528Q3MIS6 628 aa13.75□□□□□ -0.21
HNRNPC-221ENST00000555883 FAM78AQ5JUQ0 283 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms