RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CRY1Q16526 586 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 LONRF2Q1L5Z9 754 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 FAM47CQ5HY64 1035 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 ANKRD44Q8N8A2 993 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 WDR48Q8TAF3 677 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 DNAJC7Q99615 494 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 BICC1Q9H694 974 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
ATXN3-233ENST00000555816 GAKO14976 1311 aa5.98□□□□□ -1.45
ATXN3-233ENST00000555816 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 BLACEA4D250 179 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 ARVCFO00192 962 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 DNM1LO00429 736 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 MAP4K4O95819 1239 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 APPP05067 770 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 AOAHP28039 575 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 BACE1P56817 501 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 GABREP78334 506 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 PTH1RQ03431 593 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 DPTQ07507 201 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 PICALMQ13492 652 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 ZC3H12BQ5HYM0 836 aaKnown RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 TRIM68Q6AZZ1 485 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 USP30Q70CQ3 517 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 MTDHQ86UE4 582 aaKnown RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 PCDH19Q8TAB3 1148 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 LPAR1Q92633 364 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 CDC6Q99741 560 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 PRKRIP1Q9H875 184 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 TMOD4Q9NZQ9 345 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
ATXN3-233ENST00000555816 FANCIQ9NVI1 1328 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
ATXN3-233ENST00000555816 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 MAN2B1O00754 1011 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 LDHCP07864 332 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ACRV1P26436 265 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 BTDP43251 543 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 CCL14Q16627 93 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 YOD1Q5VVQ6 348 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ADGRE4PQ86SQ3 457 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 OSTM1Q86WC4 334 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 C1orf210Q8IVY1 113 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 BADQ92934 168 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 EXTL1Q92935 676 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ZNF703Q9H7S9 590 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
ATXN3-233ENST00000555816 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-233ENST00000555816 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 TRBV23-1A0A0A0MS06 115 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 ASNSP08243 561 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 PDE6AP16499 860 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 CNGA1P29973 690 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 RHBDL3P58872 404 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 CCNA1P78396 465 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 GUCY1A3Q02108 690 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 HHEXQ03014 270 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 DUSP8Q13202 625 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 LSM12Q3MHD2 195 aaKnown RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 MTERF2Q49AM1 385 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 CRB2Q5IJ48 1285 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
ATXN3-233ENST00000555816 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-233ENST00000555816 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms