RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 SLC35C1Q96A29 364 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 COL26A1Q96A83 441 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 TUBGCP2Q9BSJ2 902 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 FTHL17Q9BXU8 183 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 FAM105AQ9NUU6 356 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 RBAKQ9NYW8 714 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 CDH22Q9UJ99 828 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 IPPQ9Y573 584 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 R4GN57 208 aa12.7□□□□□ -0.38
MTHFD1-211ENST00000555709 A0A1B0GTH6 734 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 ASGR2P07307 311 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 CXCL8P10145 99 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 RAB27AP51159 221 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 COPB1P53618 953 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 ATXN1P54253 815 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 OSTNP61366 133 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 CLDN10P78369 228 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 MAN2A1Q16706 1144 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 RTN4RL1Q86UN2 441 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 FLCNQ8NFG4 579 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 PARD3BQ8TEW8 1205 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 ADAM2Q99965 735 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 TRIM6Q9C030 488 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 RGS18Q9NS28 235 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 INTS13Q9NVM9 706 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 NR2E1Q9Y466 385 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 HES2Q9Y543 173 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 PCDHB2Q9Y5E7 798 aa12.69□□□□□ -0.38
MTHFD1-211ENST00000555709 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 A0A0U1RQF3 1178 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 LRRIQ3A6PVS8 624 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 LGALS16A8MUM7 142 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 C9IYK1 514 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 ZNF623O75123 536 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 RECQL4O94761 1208 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 KRT13P13646 458 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 VAMP7P51809 220 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 DLG4P78352 724 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 SLC10A6Q3KNW5 377 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 MRPL10Q7Z7H8 261 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 CCDC94Q9BW85 323 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 APOL5Q9BWW9 433 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
MTHFD1-211ENST00000555709 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 IL18RAPO95256 599 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 SERPINC1P01008 464 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 SKIP12755 728 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 PRKCSHP14314 528 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 FAM189BP81408 668 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 XKR4Q5GH76 650 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 KIAA0319Q5VV43 1072 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 ECHDC2Q86YB7 292 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 CCDC127Q96BQ5 260 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 NAP1L5Q96NT1 182 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 CGRRF1Q99675 332 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 RTP3Q9BQQ7 232 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 POMKQ9H5K3 350 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 RPF1Q9H9Y2 349 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 RTN4Q9NQC3 1192 aaKnown RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 TOPORSQ9NS56 1045 aaPredicted RBP12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 IFNKQ9P0W0 207 aa12.67□□□□□ -0.38
MTHFD1-211ENST00000555709 ZFYVE26Q68DK2 2539 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 FSCN2O14926 492 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 AFPP02771 609 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 ADRB1P08588 477 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 NFICP08651 508 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 AKAP5P24588 427 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 ZNF75DP51815 510 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 ERVFC1P60507 584 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 UBE3AQ05086 875 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 KCNH2Q12809 1159 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 NR1I3Q14994 352 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 ACAP1Q15027 740 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 SURF1Q15526 300 aa12.66□□□□□ -0.38
MTHFD1-211ENST00000555709 TCERG1LQ5VWI1 586 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms