RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CXCL12P48061 93 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 MLLT6P55198 1093 aaPredicted RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 WDR4P57081 412 aaKnown RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 NR5A1Q13285 461 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 SF3A2Q15428 464 aaKnown RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 SLC27A1Q6PCB7 646 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 Q6ZS52 159 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 LONP2Q86WA8 852 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 CDR2LQ86X02 465 aaPredicted RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 EXOC8Q8IYI6 725 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 FAM3CQ92520 227 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 HAS1Q92839 578 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 ZNF775Q96BV0 537 aaPredicted RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 ZSWIM3Q96MP5 696 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 LXNQ9BS40 222 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 ZFAND3Q9H8U3 227 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 SH3GLB2Q9NR46 395 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 SH2B1Q9NRF2 756 aaPredicted RBP10.08□□□□□ -0.8
PRKCH-218ENST00000555628 ZMIZ1Q9ULJ6 1067 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 POLIQ9UNA4 740 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 BACE2Q9Y5Z0 518 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 PIAS3Q9Y6X2 628 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 TRIP11Q15643 1979 aa10.08□□□□□ -0.8
PRKCH-218ENST00000555628 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 INO80B-WBP1J3KQ70 363 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 ABLIM3O94929 683 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 EPN2O95208 641 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 NPTXRO95502 500 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 EDN1P05305 212 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 ZNF806P0C7X5 589 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 CPA1P15085 419 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 IFNAR1P17181 557 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 GLRA2P23416 452 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 EPHA5P54756 1037 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 MXD4Q14582 209 aaPredicted RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 PPP2R5DQ14738 602 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 SLC8B1Q6J4K2 584 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 PDXDC1Q6P996 788 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 UNQ6494/PRO21346Q6UXR6 183 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 WDR5BQ86VZ2 330 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 C3orf58Q8NDZ4 430 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 KCNB2Q92953 911 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 TRMT61BQ9BVS5 477 aaKnown RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 LSM14BQ9BX40 385 aaKnown RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 BRD9Q9H8M2 597 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 RBM12Q9NTZ6 932 aaKnown RBP10.07□□□□□ -0.8
PRKCH-218ENST00000555628 RGL1Q9NZL6 768 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 CDY1Q9Y6F8 540 aa10.07□□□□□ -0.8
PRKCH-218ENST00000555628 KCNK5O95279 499 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 LYPLA2O95372 231 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 TKTP29401 623 aaKnown RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 EVCP57679 992 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 ROR1Q01973 937 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 ELAVL2Q12926 359 aaKnown RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 CCINQ13939 588 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 FAM187BQ17R55 369 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 STPG1Q5TH74 334 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 CDCA2Q69YH5 1023 aaPredicted RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 TXNDC11Q6PKC3 985 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 CEP57Q86XR8 500 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 GATA6Q92908 595 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 SMARCD2Q92925 531 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 IRF7Q92985 503 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 PPP1R10Q96QC0 940 aaKnown RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 ZFP14Q9HCL3 533 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 DDX25Q9UHL0 483 aaKnown RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 GPSM3Q9Y4H4 160 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
PRKCH-218ENST00000555628 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
PRKCH-218ENST00000555628 RECQL4O94761 1208 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 ZIC2O95409 532 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-218ENST00000555628 SEC24AO95486 1093 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 PSMC3P17980 439 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 CCNE1P24864 410 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 GDI1P31150 447 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 VIPR2P41587 438 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
PRKCH-218ENST00000555628 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 EPHA7Q15375 998 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 CCDC6Q16204 474 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 IL31Q6EBC2 164 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 TCEAL8Q8IYN2 117 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 HACE1Q8IYU2 909 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 DEPDC1BQ8WUY9 529 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 FAM20AQ96MK3 541 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
PRKCH-218ENST00000555628 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
PRKCH-218ENST00000555628 FZD8Q9H461 694 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms