RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 CASKIN2Q8WXE0 1202 aa5.11□□□□□ -1.59
SCFD1-216ENST00000555550 SSH1Q8WYL5 1049 aa5.11□□□□□ -1.59
SCFD1-216ENST00000555550 TRHDEQ9UKU6 1024 aa5.11□□□□□ -1.59
SCFD1-216ENST00000555550 TRIM75PA6NK02 468 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 ITPKBP27987 946 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 SLC6A9P48067 706 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 SLC16A1P53985 500 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 AOX1Q06278 1338 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 ATP2B3Q16720 1220 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 ABCB5Q2M3G0 1257 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 SYDE2Q5VT97 1194 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 KIAA0895LQ68EN5 471 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 RSPH3Q86UC2 560 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 Q8NA96 180 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 C1orf162Q8NEQ5 155 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-216ENST00000555550 OR2I1PQ8NGU4 316 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 SARAFQ96BY9 339 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 FBXL20Q96IG2 436 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 GSTO2Q9H4Y5 243 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 ZNF277Q9NRM2 450 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-216ENST00000555550 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 MRFAP1Q9Y605 127 aa5.1□□□□□ -1.59
SCFD1-216ENST00000555550 CADPSQ9ULU8 1353 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 MYBBP1AQ9BQG0 1328 aaKnown RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 KLHL33A6NCF5 533 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 KIAA0391O15091 583 aaKnown RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 TP73O15350 636 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 NDUFS2O75306 463 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 KATNA1O75449 491 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 ALAS1P13196 640 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 WT1P19544 449 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 DDCP20711 480 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 PCSK1P29120 753 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 CDKN1CP49918 316 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 MTMR1Q13613 665 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 EZH2Q15910 746 aaKnown RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 MTX3Q5HYI7 312 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 KIAA1614Q5VZ46 1190 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 OTUD7BQ6GQQ9 843 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 VWA1Q6PCB0 445 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 PNMA8AQ86V59 439 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 JADE3Q92613 823 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 FAXDC2Q96IV6 333 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 PNKPQ96T60 521 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 CCDC8Q9H0W5 538 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-216ENST00000555550 ST3GAL5Q9UNP4 418 aa5.09□□□□□ -1.59
SCFD1-216ENST00000555550 TCRBV7S2A1N4TA0A589 114 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 PRKCGP05129 697 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 GRIA3P42263 894 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 EVA1CP58658 441 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 SEM1Q6ZVN7 128 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 CBARPQ8N350 705 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-216ENST00000555550 PRPF38AQ8NAV1 312 aaKnown RBP5.08□□□□□ -1.6
SCFD1-216ENST00000555550 SLC30A5Q8TAD4 765 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 RAB24Q969Q5 203 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 TDP1Q9NUW8 608 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 ADAM21Q9UKJ8 722 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
SCFD1-216ENST00000555550 SHTN1A0MZ66 631 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 ALG1L2C9J202 215 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 MPPED1O15442 326 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 C5AR1P21730 350 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 GATA3P23771 443 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 CCND1P24385 295 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 AMPD3Q01432 767 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 KIF23Q02241 960 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-216ENST00000555550 MTM1Q13496 603 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 GPR162Q16538 588 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 INAVAQ3KP66 663 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 FCRLBQ6BAA4 426 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 ZGPATQ8N5A5 531 aaKnown RBP5.07□□□□□ -1.6
SCFD1-216ENST00000555550 FITM2Q8N6M3 262 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 VGLL2Q8N8G2 317 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 WASF1Q92558 559 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 HDAC10Q969S8 669 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 TMX3Q96JJ7 454 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 SMAD5Q99717 465 aaKnown RBP5.07□□□□□ -1.6
SCFD1-216ENST00000555550 C11orf54Q9H0W9 315 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-216ENST00000555550 PCDHA13Q9Y5I0 950 aa5.07□□□□□ -1.6
SCFD1-216ENST00000555550 CDHR4A6H8M9 788 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 ORC4O43929 436 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 AMY1AP04745 511 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 SLFN5Q08AF3 891 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 EIF2B5Q13144 721 aaKnown RBP5.06□□□□□ -1.6
SCFD1-216ENST00000555550 PCBP2Q15366 365 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCFD1-216ENST00000555550 PTPN21Q16825 1174 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 KRTAP5-11Q6L8G4 156 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 C11orf87Q6NUJ2 197 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 TBC1D15Q8TC07 691 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 NUP133Q8WUM0 1156 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 LPIN2Q92539 896 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 BRIP1Q9BX63 1249 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 WNT6Q9Y6F9 365 aa5.06□□□□□ -1.6
SCFD1-216ENST00000555550 CCDC151A5D8V7 595 aa5.05□□□□□ -1.6
SCFD1-216ENST00000555550 ADM5C9JUS6 153 aa5.05□□□□□ -1.6
SCFD1-216ENST00000555550 CHRM2P08172 466 aa5.05□□□□□ -1.6
SCFD1-216ENST00000555550 PRR35P0CG20 571 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms