RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 APPL2Q8NEU8 664 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 DPP3Q9NY33 737 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 HSPBP1Q9NZL4 362 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 USP25Q9UHP3 1055 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 UBE4BO95155 1302 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 ABLIM3O94929 683 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 PRR29P0C7W0 189 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 NUCB2P80303 420 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 BMT2Q1RMZ1 405 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 TMEM31Q5JXX7 168 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 PPM1LQ5SGD2 360 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 SCARA3Q6AZY7 606 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 DSTYKQ6XUX3 929 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 CBWD2Q8IUF1 395 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 LRFN3Q9BTN0 628 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 PIDD1Q9HB75 910 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 PDE11AQ9HCR9 933 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 AGPAT3Q9NRZ7 376 aa22.19■■□□□ 1.14
VTI1B-205ENST00000555543 TULP1O00294 542 aaPredicted RBP22.18■■□□□ 1.14
VTI1B-205ENST00000555543 CCL16O15467 120 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 GPR37L1O60883 481 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 HNRNPA1P09651 372 aaKnown RBP eCLIP22.18■■□□□ 1.14
VTI1B-205ENST00000555543 HOXA9P31269 272 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 TFAMQ00059 246 aaKnown RBP22.18■■□□□ 1.14
VTI1B-205ENST00000555543 YWHAHQ04917 246 aaPredicted RBP22.18■■□□□ 1.14
VTI1B-205ENST00000555543 PTPN21Q16825 1174 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 KMT5BQ4FZB7 885 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 NT5DC4Q86YG4 428 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 ZDHHC14Q8IZN3 488 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 KIAA0895Q8NCT3 520 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 ZNF461Q8TAF7 563 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 SENP8Q96LD8 212 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 DOCK6Q96HP0 2047 aa22.18■■□□□ 1.14
VTI1B-205ENST00000555543 PTPRJQ12913 1337 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 TECTAO75443 2155 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 KIAA0391O15091 583 aaKnown RBP22.17■■□□□ 1.14
VTI1B-205ENST00000555543 OAZ2O95190 189 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 ASGR2P07307 311 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 NTHL1P78549 312 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 STK4Q13043 487 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 LMBRD2Q68DH5 695 aaPredicted RBP22.17■■□□□ 1.14
VTI1B-205ENST00000555543 C1orf127Q8N9H9 656 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 EDAQ92838 391 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 EXOC1Q9NV70 894 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 LIMD1Q9UGP4 676 aa22.17■■□□□ 1.14
VTI1B-205ENST00000555543 CLIC2O15247 247 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 SEC24AO95486 1093 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 OR4Q2P0C623 313 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 ODC1P11926 461 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 TYMPP19971 482 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 ZXDAP98168 799 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 KRBA2Q6ZNG9 492 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 OTOP3Q7RTS5 596 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 GRASPQ7Z6J2 395 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-205ENST00000555543 CXorf38Q8TB03 319 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 ACSF2Q96CM8 615 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-205ENST00000555543 MYADMQ96S97 322 aa22.16■■□□□ 1.14
VTI1B-205ENST00000555543 DOCK8Q8NF50 2099 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 ITGB3P05106 788 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 MYL1P05976 194 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 ATF2P15336 505 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 TAF6P49848 677 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 CYP2J2P51589 502 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 UVSSAQ2YD98 709 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 OVOS1Q6IE37 1185 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 RNF19BQ6ZMZ0 732 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 USP37Q86T82 979 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 PLCD3Q8N3E9 789 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 BORCS6Q96GS4 357 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 MTMR12Q9C0I1 747 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 SMOC2Q9H3U7 446 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 HCFC1R1Q9NWW0 138 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 POLIQ9UNA4 740 aa22.15■■□□□ 1.14
VTI1B-205ENST00000555543 ZNF233A6NK53 670 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 XYLBO75191 536 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 ZNF202O95125 648 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 VNN2O95498 520 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 RPN1P04843 607 aaKnown RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 POU2F2P09086 479 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 CPB1P15086 417 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 POLR2BP30876 1174 aaKnown RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 GBP2P32456 591 aaPredicted RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 DPYDQ12882 1025 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 KNOP1Q1ED39 458 aaKnown RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 TPGS2Q68CL5 300 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 GET4Q7L5D6 327 aaPredicted RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 HS2ST1Q7LGA3 356 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 TCEAL8Q8IYN2 117 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 OR5B17Q8NGF7 314 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 TMEM209Q96SK2 561 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 CYP4F11Q9HBI6 524 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 AFF4Q9UHB7 1163 aaKnown RBP22.14■■□□□ 1.13
VTI1B-205ENST00000555543 SIX4Q9UIU6 781 aa22.14■■□□□ 1.13
VTI1B-205ENST00000555543 ARHGEF37A1IGU5 675 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 CYB561D2O14569 222 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 PRRG1O14668 218 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 CYP11A1P05108 521 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 PAX3P23760 479 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 ELF1P32519 619 aa22.13■■□□□ 1.13
VTI1B-205ENST00000555543 ADCY1Q08828 1119 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms