RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SH2D3AQ9BRG2 576 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 ALG8Q9BVK2 526 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 CD2APQ9Y5K6 639 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 SCP2P22307 547 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 Q6ZVL8 140 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 USP43Q70EL4 1123 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 C11orf74Q86VG3 221 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 LRRTM3Q86VH5 581 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 CAMKK1Q8N5S9 505 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 SMC1BQ8NDV3 1235 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 MRFAP1L1Q96HT8 127 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 PPP1R10Q96QC0 940 aaKnown RBP4.45□□□□□ -1.7
SRP54-207ENST00000555535 ZSWIM4Q9H7M6 989 aa4.45□□□□□ -1.7
SRP54-207ENST00000555535 KCNU1A8MYU2 1149 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 MYO1FO00160 1098 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SLFN5Q08AF3 891 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 DYRK1AQ13627 763 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SEPT7Q16181 437 aaKnown RBP4.44□□□□□ -1.7
SRP54-207ENST00000555535 TKFCQ3LXA3 575 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 Q6ZTC4 211 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 UBE3BQ7Z3V4 1068 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SYNPOQ8N3V7 929 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 GALNT16Q8N428 558 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 NLGN4YQ8NFZ3 816 aaPredicted RBP4.44□□□□□ -1.7
SRP54-207ENST00000555535 PRSS3P2Q8NHM4 247 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 TBC1D15Q8TC07 691 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SNX19Q92543 992 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 RAX2Q96IS3 184 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 LYZL4Q96KX0 146 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 RNPC3Q96LT9 517 aaKnown RBP4.44□□□□□ -1.7
SRP54-207ENST00000555535 ORAI2Q96SN7 254 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SPTLC3Q9NUV7 552 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 SLC23A1Q9UHI7 598 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 AFG3L2Q9Y4W6 797 aa4.44□□□□□ -1.7
SRP54-207ENST00000555535 EME2A4GXA9 379 aaPredicted RBP4.43□□□□□ -1.7
SRP54-207ENST00000555535 CDHR4A6H8M9 788 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 FCER1AP12319 257 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 LINC00205P59089 165 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 ZNF844Q08AG5 666 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 HLXQ14774 488 aaPredicted RBP4.43□□□□□ -1.7
SRP54-207ENST00000555535 ATP2B3Q16720 1220 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 CCDC144BQ3MJ40 725 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 PREPLQ4J6C6 727 aaPredicted RBP4.43□□□□□ -1.7
SRP54-207ENST00000555535 PRAMEF17Q5VTA0 474 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 CYFIP2Q96F07 1278 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 GPR101Q96P66 508 aaPredicted RBP4.43□□□□□ -1.7
SRP54-207ENST00000555535 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 PIF1Q9H611 641 aa4.43□□□□□ -1.7
SRP54-207ENST00000555535 TISP43B9A030 160 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 PRRT4C9JH25 899 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 PRSS44E7EML9 344 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 ENDOD1O94919 500 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 LPLP06858 475 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 SFPQP23246 707 aaKnown RBP eCLIP4.42□□□□□ -1.7
SRP54-207ENST00000555535 LSSP48449 732 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 ANXA11P50995 505 aaKnown RBP4.42□□□□□ -1.7
SRP54-207ENST00000555535 UGT8Q16880 541 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 SREK1Q8WXA9 508 aaKnown RBP4.42□□□□□ -1.7
SRP54-207ENST00000555535 STON2Q8WXE9 905 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 TBC1D5Q92609 795 aa4.42□□□□□ -1.7
SRP54-207ENST00000555535 RBM12Q9NTZ6 932 aaKnown RBP4.42□□□□□ -1.7
SRP54-207ENST00000555535 AJAP1Q9UKB5 411 aaPredicted RBP4.42□□□□□ -1.7
SRP54-207ENST00000555535 SMIM35A0A1B0GVV1 85 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 SERINC4A6NH21 518 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 FAM90A8PA6NJQ4 464 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 WNT10BO00744 389 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 FAM90A13PP0C7W8 464 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 FAM90A24PP0C7X0 464 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 EBLN1P0CF75 366 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 PPP3CBP16298 524 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 ADCYAP1R1P41586 468 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 THBS3P49746 956 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 TCEA2Q15560 299 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 SLC29A4Q7RTT9 530 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 ZNF804AQ7Z570 1209 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 DHX37Q8IY37 1157 aaKnown RBP4.41□□□□□ -1.7
SRP54-207ENST00000555535 ADGRG5Q8IZF4 528 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 NANOGP1Q8N7R0 232 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 ACRBPQ8NEB7 543 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 NINJ1Q92982 152 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 FATE1Q969F0 183 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 SH3BP4Q9P0V3 963 aa4.41□□□□□ -1.7
SRP54-207ENST00000555535 NOC2LQ9Y3T9 749 aaKnown RBP4.41□□□□□ -1.7
SRP54-207ENST00000555535 FGBP02675 491 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 SEMA3AQ14563 771 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
SRP54-207ENST00000555535 LRRC41Q15345 812 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 FSCN1Q16658 493 aaKnown RBP4.4□□□□□ -1.71
SRP54-207ENST00000555535 CD300EQ496F6 205 aaPredicted RBP4.4□□□□□ -1.71
SRP54-207ENST00000555535 ATG9BQ674R7 924 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 CATSPERGQ6ZRH7 1159 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 RASSF3Q86WH2 238 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 CNGA4Q8IV77 575 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 TARS2Q9BW92 718 aaKnown RBP4.4□□□□□ -1.71
SRP54-207ENST00000555535 GREM2Q9H772 168 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 SERTAD4Q9NUC0 356 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 TXLNGQ9NUQ3 528 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms