RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	INTS8	Q75QN2	995 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	DGLUCY	Q7Z3D6	616 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	FAM114A1	Q8IWE2	563 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	BRSK2	Q8IWQ3	736 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	TDRD5	Q8NAT2	981 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	FAM200A	Q8TCP9	573 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	SLC22A17	Q8WUG5	538 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	EIF2A	Q9BY44	585 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	TMEM117	Q9H0C3	514 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	TSPY26P	Q9H489	355 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	ENTPD7	Q9NQZ7	604 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	CNTN3	Q9P232	1028 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	ANKFY1	Q9P2R3	1169 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	LIMD1	Q9UGP4	676 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	LRFN2	Q9ULH4	789 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	DUSP12	Q9UNI6	340 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	CTNND2	Q9UQB3	1225 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	C2CD2	Q9Y426	696 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	BAHCC1	Q9P281	2608 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	ASPM	Q8IZT6	3477 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZZEF1	O43149	2961 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	FRY	Q5TBA9	3013 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	EXOC3	O60645	756 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	AKAP3	O75969	853 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	LMNA	P02545	664 aa	Known RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	ITGA4	P13612	1032 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	PAX3	P23760	479 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	EEF1G	P26641	437 aa	Known RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	GTF2H1	P32780	548 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	PPM1A	P35813	382 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	YARS	P54577	528 aa	Known RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	CYP24A1	Q07973	514 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	NCAPH	Q15003	741 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	PSMD6	Q15008	389 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	IQCB1	Q15051	598 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZBTB6	Q15916	424 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	CLLU1OS	Q5K130	101 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	CDKAL1	Q5VV42	579 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	AGMO	Q6ZNB7	445 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	TMEM173	Q86WV6	379 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	C12orf76	Q8N812	135 aa	Predicted RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	CNTNAP3B	Q96NU0	1288 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	CNTNAP3	Q9BZ76	1288 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZBP1	Q9H171	429 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	DNAJC25	Q9H1X3	360 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	SEMA4A	Q9H3S1	761 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	RPF1	Q9H9Y2	349 aa	Known RBP	10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	DLGAP2	Q9P1A6	1054 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	IRAK3	Q9Y616	596 aa		10.41	□□□□□ -0.74
PRKCH-215	ENST00000555382	SPEG	Q15772	3267 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	KRBA1	A5PL33	1030 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	TRIM49B	A6NDI0	452 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	TISP43	B9A030	160 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	CLIC2	O15247	247 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	STX10	O60499	249 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	N4BP1	O75113	896 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	OFD1	O75665	1012 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	RECQL4	O94761	1208 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	EPB41	P11171	864 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	EPCAM	P16422	314 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZNF18	P17022	549 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	MATR3	P43243	847 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SPAG1	Q07617	926 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SMC1A	Q14683	1233 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	ENOX2	Q16206	610 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SLC10A6	Q3KNW5	377 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	RARS2	Q5T160	578 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SPOUT1	Q5T280	376 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	CES5A	Q6NT32	575 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	GLB1L	Q6UWU2	654 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	IRF2BP1	Q8IU81	584 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	DHX40	Q8IX18	779 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	LRRC43	Q8N309	656 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	PLCD3	Q8N3E9	789 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	GSTCD	Q8NEC7	633 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	FLCN	Q8NFG4	579 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	PARD3B	Q8TEW8	1205 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZNF558	Q96NG5	402 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	RTP3	Q9BQQ7	232 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	FAM213A	Q9BRX8	229 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SRRT	Q9BXP5	876 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	MRPL9	Q9BYD2	267 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	IKZF4	Q9H2S9	585 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	MFSD1	Q9H3U5	465 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	NXF3	Q9H4D5	531 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	RSAD1	Q9HA92	442 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SLC38A7	Q9NVC3	462 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	DZANK1	Q9NVP4	752 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	RBAK	Q9NYW8	714 aa	Predicted RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	SPG21	Q9NZD8	308 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	PUF60	Q9UHX1	559 aa	Known RBP	10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	USP20	Q9Y2K6	914 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	NFE2L3	Q9Y4A8	694 aa		10.4	□□□□□ -0.74
PRKCH-215	ENST00000555382	ARL5C	A6NH57	179 aa		10.39	□□□□□ -0.75
PRKCH-215	ENST00000555382	XPOT	O43592	962 aa	Known RBP	10.39	□□□□□ -0.75
PRKCH-215	ENST00000555382	PAPLN	O95428	1278 aa		10.39	□□□□□ -0.75
PRKCH-215	ENST00000555382	CYP3A5	P20815	502 aa		10.39	□□□□□ -0.75
PRKCH-215	ENST00000555382	ACOT2	P49753	483 aa		10.39	□□□□□ -0.75

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