RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 DCTN3O75935 186 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 RAD17O75943 681 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.91
SYNE2-217ENST00000555022 PTPN4P29074 926 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 RASA3Q14644 834 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 CNPY1Q3B7I2 92 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 FAXCQ5TGI0 409 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 MFSD5Q6N075 450 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 PIP4K2CQ8TBX8 421 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 DCLK3Q9C098 648 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 NMUR2Q9GZQ4 415 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 ANKRD2Q9GZV1 360 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 NENFQ9UMX5 172 aa9.4□□□□□ -0.91
SYNE2-217ENST00000555022 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 PIK3R2O00459 728 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 ASMTLO95671 621 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 GMPRP36959 345 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 MARSP56192 900 aaKnown RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 FMO1Q01740 532 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 BMPR2Q13873 1038 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 SEZ6Q53EL9 994 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 SLFN13Q68D06 897 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 C11orf63Q6NUN7 778 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 TRABD2AQ86V40 505 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 RBM41Q96IZ5 413 aaKnown RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 EBF3Q9H4W6 596 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 HEMK1Q9Y5R4 338 aaPredicted RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 GSC2O15499 205 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 TRPA1O75762 1119 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 VAMP7P51809 220 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 UBAP2LQ14157 1087 aaKnown RBP9.39□□□□□ -0.91
SYNE2-217ENST00000555022 DDB1Q16531 1140 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 GRAMD1BQ3KR37 738 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 WDR72Q3MJ13 1102 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 RAPH1Q70E73 1250 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 DPH6Q7L8W6 267 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 RSPH3Q86UC2 560 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 SATL1Q86VE3 508 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 RHPN2Q8IUC4 686 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 TEX9Q8N6V9 391 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 CEP120Q8N960 986 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 WDR66Q8TBY9 1149 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 LRCH1Q9Y2L9 728 aa9.39□□□□□ -0.91
SYNE2-217ENST00000555022 LOC100653049A0A140TA62 436 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 FCHO1O14526 889 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 CYB561D2O14569 222 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 GAS7O60861 476 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 KRT34O76011 436 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 NPEPPSP55786 919 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 GPSM2P81274 684 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ASPRV1Q53RT3 343 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 KCNT1Q5JUK3 1230 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 GSTCDQ8NEC7 633 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 CFAP36Q96G28 342 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TRAIPQ9BWF2 469 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ROPN1BQ9BZX4 212 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ROPN1Q9HAT0 212 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 TAS2R1Q9NYW7 299 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 GTF3C4Q9UKN8 822 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ADRB2P07550 413 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 LDHCP07864 332 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 LYNP07948 512 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 IVDP26440 423 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 SERPINB6P35237 376 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ARL4CP56559 192 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 PEX3P56589 373 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 SLC25A3Q00325 362 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 SLC34A1Q06495 639 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 MOGSQ13724 837 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ANKRD22Q5VYY1 191 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 PLA2G4FQ68DD2 849 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 CEP128Q6ZU80 1094 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ARID3BQ8IVW6 561 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-217ENST00000555022 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 MPP4Q96JB8 637 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 MMP19Q99542 508 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ZWILCHQ9H900 591 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 GALNT8Q9NY28 637 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 G3V3G9 751 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 CREB3O43889 395 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 DNAJC6O75061 913 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 NPTXRO95502 500 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 KRT1P04264 644 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ALAS1P13196 640 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 CYP11B1P15538 503 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ACADSP16219 412 aa9.38□□□□□ -0.91
SYNE2-217ENST00000555022 ITIH2P19823 946 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms