RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 SDK1Q7Z5N4 2213 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF197O14709 1029 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 PPEF2O14830 753 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 PIGRP01833 764 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 CYP3A5P20815 502 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF131P52739 623 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 TWF1Q12792 350 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF280DQ6N043 979 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 SLC39A4Q6P5W5 647 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 TPRG1Q6ZUI0 275 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 MAP4K3Q8IVH8 894 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 NELL1Q92832 810 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 REEP2Q9BRK0 252 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 BCO2Q9BYV7 579 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZFP14Q9HCL3 533 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 FBXO4Q9UKT5 387 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 MAFFQ9ULX9 164 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 TBX20Q9UMR3 447 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 KIF3AQ9Y496 699 aa13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF638Q14966 1978 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-207ENST00000554677 KIF26AQ9ULI4 1882 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 A0A0B4J269 797 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 SLC26A4O43511 780 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 GJA1P17302 382 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 ID4P47928 161 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 FOXK2Q01167 660 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 GRM2Q14416 872 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 VITQ6UXI7 678 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 PDZD4Q76G19 769 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 GPBP1Q86WP2 473 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 AK8Q96MA6 479 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 NELL2Q99435 816 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 DNAJC25Q9H1X3 360 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 TRPV4Q9HBA0 871 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 SPATA6Q9NWH7 488 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 RALGAPA1Q6GYQ0 2036 aa13.3□□□□□ -0.28
MTHFD1-207ENST00000554677 TSC2P49815 1807 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 H3BQV1 296 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 SPTLC1O15269 473 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 OGTO15294 1046 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 VIPR2P41587 438 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 MAGEA9P43362 315 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 RPS9P46781 194 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 CSTF1Q05048 431 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 GPR17Q13304 367 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 MCM6Q14566 821 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 CYP4A22Q5TCH4 519 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF852Q6ZMS4 543 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 DNASE1L2Q92874 299 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 SMARCD2Q92925 531 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 RSPRY1Q96DX4 576 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 TMEM209Q96SK2 561 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 TRMT61BQ9BVS5 477 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 TRPV5Q9NQA5 729 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 CPSF3Q9UKF6 684 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 YIPF1Q9Y548 306 aa13.29□□□□□ -0.28
MTHFD1-207ENST00000554677 NUP210Q8TEM1 1887 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 ANKRD63C9JTQ0 380 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 H0YCG3 227 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 ARNTLO00327 626 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 MYL4P12829 197 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 CPB1P15086 417 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 PLCG1P19174 1290 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 LIG4P49917 911 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 LILRA4P59901 499 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 GTF2BQ00403 316 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 DUSP4Q13115 394 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 TEAD2Q15562 447 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 KYAT1Q16773 422 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 CENPPQ6IPU0 288 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 MYCT1Q8N699 235 aa13.28□□□□□ -0.28
MTHFD1-207ENST00000554677 TTC9BQ8N6N2 239 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms