RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GBP7Q8N8V2 638 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KBTBD3Q8NAB2 608 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 DNERQ8NFT8 737 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 RASSF8Q8NHQ8 419 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CAGE1Q8TC20 777 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MAML1Q92585 1016 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ANKS1AQ92625 1134 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MFSD3Q96ES6 412 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 DYNLL2Q96FJ2 89 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CFAP36Q96G28 342 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 EPSTI1Q96J88 318 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PPM1MQ96MI6 270 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 WDR24Q96S15 920 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SDF4Q9BRK5 362 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CRACR2AQ9BSW2 395 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NKX2-4Q9H2Z4 354 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 UPF2Q9HAU5 1272 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PRDM5Q9NQX1 630 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HELLSQ9NRZ9 838 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TOPORSQ9NS56 1045 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 QPCTLQ9NXS2 382 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CWC15Q9P013 229 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PRKAG3Q9UGI9 489 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CTNNA3Q9UI47 895 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PRELID1Q9Y255 219 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NOSIPQ9Y314 301 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KIF3AQ9Y496 699 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 JRKLQ9Y4A0 524 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 RIPK3Q9Y572 518 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MYH6P13533 1939 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TTC41PQ6P2S7 1318 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SALL3Q9BXA9 1300 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 GOLGA6L10A0A0M3HER8 536 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 LACTBL1A8MY62 500 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 STMND1H3BQB6 276 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HAS3O00219 553 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HOXC11O43248 304 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 B4GALT4O60513 344 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PGK2P07205 417 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PF4V1P10720 104 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SCG2P13521 617 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CPT1AP50416 773 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CTAG1AP78358 180 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NUCB2P80303 420 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 GUCA2AQ02747 115 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TNFAIP2Q03169 654 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NMIQ13287 307 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 IQCB1Q15051 598 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 RABEP1Q15276 862 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ZYXQ15942 572 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 INAQ16352 499 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PPP2R5EQ16537 467 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 DBN1Q16643 649 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PTPN21Q16825 1174 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TRIM71Q2Q1W2 868 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC122Q5T0U0 273 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC183Q5T5S1 534 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KIAA0319Q5VV43 1072 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 FAM205BPQ63HN1 556 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ARHGAP11AQ6P4F7 1023 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CNNM4Q6P4Q7 775 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ALKBH5Q6P6C2 394 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CNSTQ6PJW8 725 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 LPCAT2Q7L5N7 544 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 EPM2AIP1Q7L775 607 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SLC9B2Q86UD5 537 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TLK2Q86UE8 772 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 RAB11FIP4Q86YS3 637 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SPATA2LQ8IUW3 424 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MAP4K3Q8IVH8 894 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CEP97Q8IW35 865 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC170Q8IYT3 715 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PLD6Q8N2A8 252 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CBARPQ8N350 705 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 C17orf53Q8N3J3 647 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SDR42E1Q8WUS8 393 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 LEO1Q8WVC0 666 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 UCMAQ8WVF2 138 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HLA-CQ95604 372 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 FERMT2Q96AC1 680 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF845Q96IR2 970 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SEC62Q99442 399 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MTG1Q9BT17 334 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TARS2Q9BW92 718 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NIFKQ9BYG3 293 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 UNKQ9C0B0 810 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HIPK3Q9H422 1215 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ARMT1Q9H993 441 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 LIN28AQ9H9Z2 209 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 A1CFQ9NQ94 594 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 FBXO28Q9NVF7 368 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KLHL11Q9NVR0 708 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KBTBD4Q9NVX7 518 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 DACT1Q9NYF0 836 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CYP39A1Q9NYL5 469 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ARHGAP28Q9P2N2 729 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 DDX19BQ9UMR2 479 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MAPK8IP1Q9UQF2 711 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MSRB2Q9Y3D2 182 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SPO11Q9Y5K1 396 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms