RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZNF507Q8TCN5 953 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 ACSF2Q96CM8 615 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-211ENST00000554310 OXCT2Q9BYC2 517 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-211ENST00000554310 PIDD1Q9HB75 910 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 FBXL5Q9UKA1 691 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 TECTAO75443 2155 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 DOCK8Q8NF50 2099 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 ANO9A1A5B4 782 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 PIRO00625 290 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 PPEF2O14830 753 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 XYLBO75191 536 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 PRPF40AO75400 957 aaKnown RBP14.13□□□□□ -0.15
SHMT2-211ENST00000554310 OAZ2O95190 189 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 MBD3O95983 291 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 ODC1P11926 461 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 TYMPP19971 482 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 CASP1P29466 404 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 HOXD13P35453 343 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 NDUFA8P51970 172 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 LILRA4P59901 499 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 YWHAHQ04917 246 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-211ENST00000554310 UVSSAQ2YD98 709 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 DSTYKQ6XUX3 929 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 HS2ST1Q7LGA3 356 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 GRAMD1CQ8IYS0 662 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 ZNF461Q8TAF7 563 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 SLC7A14Q8TBB6 771 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 SCFD1Q8WVM8 642 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 ZNF560Q96MR9 790 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 GZF1Q9H116 711 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-211ENST00000554310 C11orf16Q9NQ32 467 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 EXOC1Q9NV70 894 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
SHMT2-211ENST00000554310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-211ENST00000554310 WDR27A2RRH5 827 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 ABLIM3O94929 683 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 PNPLA4P41247 253 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 TAF6P49848 677 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 TPGS2Q68CL5 300 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 USP37Q86T82 979 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 TMEM130Q8N3G9 435 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 EDAQ92838 391 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 PCIF1Q9H4Z3 704 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 KIAA1586Q9HCI6 787 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 AGPAT3Q9NRZ7 376 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 HSPBP1Q9NZL4 362 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 CGNQ9P2M7 1197 aaKnown RBP14.12□□□□□ -0.15
SHMT2-211ENST00000554310 MAFFQ9ULX9 164 aa14.12□□□□□ -0.15
SHMT2-211ENST00000554310 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 FAM86C2PA6NEL3 165 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 OR6C75A6NL08 312 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 PRR33A8MZF0 331 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 KLRC4O43908 158 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 TRIOO75962 3097 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 CPB1P15086 417 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 ATF2P15336 505 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 WNT7BP56706 349 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 ZXDAP98168 799 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 TFAMQ00059 246 aaKnown RBP14.11□□□□□ -0.15
SHMT2-211ENST00000554310 PSMD2Q13200 908 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 MTMR3Q13615 1198 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 SURF1Q15526 300 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 SV2CQ496J9 727 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 OVOS1Q6IE37 1185 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 TCEAL8Q8IYN2 117 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 ZSWIM2Q8NEG5 633 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 GOLGA5Q8TBA6 731 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
SHMT2-211ENST00000554310 CACTINQ8WUQ7 758 aaKnown RBP14.11□□□□□ -0.15
SHMT2-211ENST00000554310 CCDC34Q96HJ3 373 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 SENP8Q96LD8 212 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 GDPD2Q9HCC8 539 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 SLC39A2Q9NP94 309 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.11□□□□□ -0.15
SHMT2-211ENST00000554310 AFF4Q9UHB7 1163 aaKnown RBP14.11□□□□□ -0.15
SHMT2-211ENST00000554310 ITGA11Q9UKX5 1188 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 DSEQ9UL01 958 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 SORCS3Q9UPU3 1222 aa14.11□□□□□ -0.15
SHMT2-211ENST00000554310 MYO10Q9HD67 2058 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 MUC6Q6W4X9 2439 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 PRRG1O14668 218 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 SPTLC1O15269 473 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 TGFB1I1O43294 461 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 CYP11A1P05108 521 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 TMEM191BP0C7N4 346 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-211ENST00000554310 ELF1P32519 619 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 ARPP19P56211 112 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 KRBA2Q6ZNG9 492 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 CBWD2Q8IUF1 395 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 NELFCDQ8IXH7 590 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 C12orf56Q8IXR9 622 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 LRRC52Q8N7C0 313 aa14.1□□□□□ -0.15
SHMT2-211ENST00000554310 KIAA0895Q8NCT3 520 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms