RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 GSSP48637 474 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ERFP50548 548 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TXNRD1Q16881 649 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CAPN12Q6ZSI9 719 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 FASTKD5Q7L8L6 764 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 IRF2BP2Q7Z5L9 587 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ULK2Q8IYT8 1036 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CCDC110Q8TBZ0 833 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 MAML1Q92585 1016 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 SGF29Q96ES7 293 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 C7orf25Q9BPX7 421 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TRIM9Q9C026 710 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 KLHL3Q9UH77 587 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TMA7Q9Y2S6 64 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 PCDHGB5Q9Y5G0 923 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CASQ2O14958 399 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 CYTH3O43739 400 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CDH16O75309 829 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 IDH1O75874 414 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ATP6V1B1P15313 513 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 KCNA2P16389 499 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 PMLP29590 882 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CHKAP35790 457 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 KPNA1P52294 538 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 NR1H2P55055 460 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TUBA4AP68366 448 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 IGBP1P78318 339 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 FKBP4Q02790 459 aaKnown RBP eCLIP10.07□□□□□ -0.8
SIX4-202ENST00000554079 FUT2Q10981 343 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ACAP1Q15027 740 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 EFTUD2Q15029 972 aaKnown RBP eCLIP10.07□□□□□ -0.8
SIX4-202ENST00000554079 PDIA6Q15084 440 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 FXNQ16595 210 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 LRRC36Q1X8D7 754 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CLEC4GQ6UXB4 293 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 KYAT3Q6YP21 454 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 TRABD2AQ86V40 505 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ZDHHC14Q8IZN3 488 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 FBXO27Q8NI29 283 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 GDPD5Q8WTR4 605 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 BORCS5Q969J3 196 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CLPTM1LQ96KA5 538 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 EGLN2Q96KS0 407 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 SLC39A3Q9BRY0 314 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 NUP85Q9BW27 656 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 SLC7A5P2Q9GIP4 190 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 LIN28AQ9H9Z2 209 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 MAGEF1Q9HAY2 307 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TBK1Q9UHD2 729 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 SLC7A8Q9UHI5 535 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 PADI4Q9UM07 663 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 MAD1L1Q9Y6D9 718 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 FLT1P17948 1338 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 LTN1O94822 1766 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 TRIM64CA6NLI5 447 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 BTBD11A6QL63 1104 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PFDN6O15212 129 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PEX1O43933 1283 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 RBP3P10745 1247 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CHRNB1P11230 501 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 POLR2EP19388 210 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 FDFT1P37268 417 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CSE1LP55060 971 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 NCKAP1LP55160 1127 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CDK16Q00536 496 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PPATQ06203 517 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 AIMP1Q12904 312 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 CLUL1Q15846 466 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ARSHQ5FYA8 562 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 C6orf163Q5TEZ5 329 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ALKBH5Q6P6C2 394 aaKnown RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 PAOXQ6QHF9 649 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 TMPRSS6Q8IU80 811 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ZNF654Q8IZM8 581 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 TTC5Q8N0Z6 440 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 VGLL2Q8N8G2 317 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 FANCBQ8NB91 859 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 SCFD1Q8WVM8 642 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 ZNF75CPQ92670 426 aaPredicted RBP10.06□□□□□ -0.8
SIX4-202ENST00000554079 TTC25Q96NG3 672 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 MYD88Q99836 296 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 KLC2Q9H0B6 622 aa10.06□□□□□ -0.8
SIX4-202ENST00000554079 FBXO6Q9NRD1 293 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms