RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ID4P47928 161 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 RGS19P49795 217 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 SESN3P58005 492 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 FPGSQ05932 587 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 MGAT2Q10469 447 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 CD300EQ496F6 205 aaPredicted RBP3.29□□□□□ -1.88
SRP54-204ENST00000553923 AWAT2Q6E213 333 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 TECPR1Q7Z6L1 1165 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 CLNKQ7Z7G1 428 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 DCBLD1Q8N8Z6 715 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 TOR1AIP2Q8NFQ8 470 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 OR2I1PQ8NGU4 316 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 CYFIP2Q96F07 1278 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 ACE2Q9BYF1 805 aaPredicted RBP3.29□□□□□ -1.88
SRP54-204ENST00000553923 QRSL1Q9H0R6 528 aaKnown RBP3.29□□□□□ -1.88
SRP54-204ENST00000553923 MTMR4Q9NYA4 1195 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 RUVBL1Q9Y265 456 aaKnown RBP3.29□□□□□ -1.88
SRP54-204ENST00000553923 LRP12Q9Y561 859 aa3.29□□□□□ -1.88
SRP54-204ENST00000553923 A0A087X0B3 334 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 PPM1GO15355 546 aaPredicted RBP3.28□□□□□ -1.88
SRP54-204ENST00000553923 SUN1O94901 812 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 TOP3BO95985 862 aaKnown RBP3.28□□□□□ -1.88
SRP54-204ENST00000553923 NHLRC4P0CG21 123 aaPredicted RBP3.28□□□□□ -1.88
SRP54-204ENST00000553923 GSPT1P15170 499 aaKnown RBP3.28□□□□□ -1.88
SRP54-204ENST00000553923 PPP3CBP16298 524 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 EPHB2P29323 1055 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 MALLQ13021 153 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 PROSER3Q2NL68 480 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 RUSC1-AS1Q66K80 236 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 SLC9A4Q6AI14 798 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 HOMER1Q86YM7 354 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 ADGRG5Q8IZF4 528 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 CCHCR1Q8TD31 782 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 RFKQ969G6 155 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 QTRT1Q9BXR0 403 aaKnown RBP3.28□□□□□ -1.88
SRP54-204ENST00000553923 KLC4Q9NSK0 619 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 PADI4Q9UM07 663 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 NEU2Q9Y3R4 380 aa3.28□□□□□ -1.88
SRP54-204ENST00000553923 TARM1B6A8C7 271 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 PPEF2O14830 753 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 KIAA0391O15091 583 aaKnown RBP3.27□□□□□ -1.89
SRP54-204ENST00000553923 ULK1O75385 1050 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 MTHFD2P13995 350 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 DDCP20711 480 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 DRD4P21917 467 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 ANXA11P50995 505 aaKnown RBP3.27□□□□□ -1.89
SRP54-204ENST00000553923 NXPH1P58417 271 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 MC2RQ01718 297 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 DHCR24Q15392 516 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 SUPT20HL1Q3ZLR7 823 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 TMEM119Q4V9L6 283 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 SUMO4Q6EEV6 95 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 NLGN4YQ8NFZ3 816 aaPredicted RBP3.27□□□□□ -1.89
SRP54-204ENST00000553923 TGFBRAP1Q8WUH2 860 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 SREK1Q8WXA9 508 aaKnown RBP3.27□□□□□ -1.89
SRP54-204ENST00000553923 REPS1Q96D71 796 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 MFSD3Q96ES6 412 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 FEZ1Q99689 392 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 ZSWIM4Q9H7M6 989 aa3.27□□□□□ -1.89
SRP54-204ENST00000553923 MYBBP1AQ9BQG0 1328 aaKnown RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 EIF5BO60841 1220 aaKnown RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 HAUS5O94927 633 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 AGFG2O95081 481 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 HNRNPCP07910 306 aaKnown RBP eCLIP3.26□□□□□ -1.89
SRP54-204ENST00000553923 SBK3P0C264 359 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 CBSLP0DN79 551 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 CERS1P27544 350 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 PCSK6P29122 969 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 MPGP29372 298 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 CBSP35520 551 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 NR4A2P43354 598 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 CTXN1P60606 82 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 HLXQ14774 488 aaPredicted RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 FAM153CQ494X1 144 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 TOR2AQ5JU69 321 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 YTHDF3Q7Z739 585 aaKnown RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 DENND1AQ8TEH3 1009 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 LEO1Q8WVC0 666 aaPredicted RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 APPBP2Q92624 585 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 PBKQ96KB5 322 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 KLHL32Q96NJ5 620 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 ADI1Q9BV57 179 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 SPRTNQ9H040 489 aaPredicted RBP3.26□□□□□ -1.89
SRP54-204ENST00000553923 PIF1Q9H611 641 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 VTA1Q9NP79 307 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 FANCLQ9NW38 375 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 PLAAQ9Y263 795 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 TBC1D30Q9Y2I9 924 aa3.26□□□□□ -1.89
SRP54-204ENST00000553923 CNTNAP2Q9UHC6 1331 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 GOLGA8AA7E2F4 631 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 TISP43B9A030 160 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 E7ENX8 843 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 MYO1FO00160 1098 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 PPP6CO00743 305 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 ZEB2O60315 1214 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 URI1O94763 535 aaPredicted RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 CCT4P50991 539 aaKnown RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 TAP2Q03519 686 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 ITIH3Q06033 890 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 RAPGEF1Q13905 1077 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms