RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 HOXA9P31269 272 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 SNRPFP62306 86 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ROR1Q01973 937 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 CTXN3Q4LDR2 81 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PPM1LQ5SGD2 360 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF280DQ6N043 979 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 RTL10Q7L3V2 364 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 FSIP1Q8NA03 581 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 TDRD5Q8NAT2 981 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ACSF2Q96CM8 615 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 HSPBP1Q9NZL4 362 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 TIMM13Q9Y5L4 95 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 WDFY4Q6ZS81 3184 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF233A6NK53 670 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 SPTLC1O15269 473 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 GPR37L1O60883 481 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF202O95125 648 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 ATF2P15336 505 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 ARPP19P56211 112 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 WNT7BP56706 349 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 TFAMQ00059 246 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 STK4Q13043 487 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 PSMD2Q13200 908 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 KNOP1Q1ED39 458 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 BMT2Q1RMZ1 405 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 KMT5BQ4FZB7 885 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 OTOP3Q7RTS5 596 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 USP37Q86T82 979 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 SENP8Q96LD8 212 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 OXCT2Q9BYC2 517 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 KIAA1586Q9HCI6 787 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 PDE11AQ9HCR9 933 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 AGPAT3Q9NRZ7 376 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 EXOC1Q9NV70 894 aa11.04□□□□□ -0.64
HNRNPC-208ENST00000553753 GOLGA6L4A6NEF3 574 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 ODC1P11926 461 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 TYMPP19971 482 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 ELF1P32519 619 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 TAF6P49848 677 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 TMEM31Q5JXX7 168 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 TPGS2Q68CL5 300 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 KRBA2Q6ZNG9 492 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CBWD2Q8IUF1 395 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 ZDHHC14Q8IZN3 488 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 EDAQ92838 391 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 C11orf16Q9NQ32 467 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 LIMD1Q9UGP4 676 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CLUHO75153 1309 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 SCN1AP35498 2009 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 ARHGEF37A1IGU5 675 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 PRRG1O14668 218 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CLIC2O15247 247 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CCL16O15467 120 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 XYLBO75191 536 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 RPN1P04843 607 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 ITGB3P05106 788 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 SURF1Q15526 300 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 PTPN21Q16825 1174 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 OVOS1Q6IE37 1185 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 GRASPQ7Z6J2 395 aaPredicted RBP11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 TCEAL8Q8IYN2 117 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 KIAA0895Q8NCT3 520 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 CYP4F11Q9HBI6 524 aa11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.03□□□□□ -0.64
HNRNPC-208ENST00000553753 DENND4AQ7Z401 1863 aa11.02□□□□□ -0.64
HNRNPC-208ENST00000553753 DOCK6Q96HP0 2047 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 KPNA7A9QM74 516 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CYB561D2O14569 222 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 N4BP1O75113 896 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CYP11A1P05108 521 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CPB1P15086 417 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 PNPLA4P41247 253 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CYP2J2P51589 502 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 ZXDAP98168 799 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 ADCY1Q08828 1119 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 DPYDQ12882 1025 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 SV2CQ496J9 727 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 C12orf56Q8IXR9 622 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CSGALNACT2Q8N6G5 542 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 XXYLT1Q8NBI6 393 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 GOLGA5Q8TBA6 731 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 BORCS6Q96GS4 357 aa11.02□□□□□ -0.65
HNRNPC-208ENST00000553753 ZNF560Q96MR9 790 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms