RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TTC7BQ86TV6 843 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 Q8NA96 180 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PRPF38AQ8NAV1 312 aaKnown RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 TMEM125Q96AQ2 219 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 COA7Q96BR5 231 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 MRGPRX4Q96LA9 322 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 TLR10Q9BXR5 811 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 SLC13A1Q9BZW2 595 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 LIMCH1Q9UPQ0 1083 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA9Q9Y5G4 932 aaKnown RBP5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA8Q9Y5G5 932 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA7Q9Y5G6 932 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA6Q9Y5G7 932 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 PCDHGA3Q9Y5H0 932 aa5.29□□□□□ -1.56
SCFD1-210ENST00000553693 POLR2AP24928 1970 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 CCDC151A5D8V7 595 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 FZD9O00144 591 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 IGSF3O75054 1194 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 KATNA1O75449 491 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 CACNA2D1P54289 1103 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 C21orf58P58505 322 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 ZNF280AP59817 542 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 IL10RAQ13651 578 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 PREPLQ4J6C6 727 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 NSUN6Q8TEA1 469 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 KAT5Q92993 513 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 KLHL32Q96NJ5 620 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 SPATA5L1Q9BVQ7 753 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 ALG13Q9NP73 1137 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 GNL3LQ9NVN8 582 aaKnown RBP5.28□□□□□ -1.56
SCFD1-210ENST00000553693 FOXJ2Q9P0K8 574 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
SCFD1-210ENST00000553693 SALL3Q9BXA9 1300 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 CCDC195A0A1B0GUA6 201 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 YY2O15391 372 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 DTNBO60941 627 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 SBK3P0C264 359 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 SRGNP10124 158 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 EDNRBP24530 442 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 FOLR3P41439 243 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 ANXA11P50995 505 aaKnown RBP5.27□□□□□ -1.57
SCFD1-210ENST00000553693 FAM50AQ14320 339 aaKnown RBP5.27□□□□□ -1.57
SCFD1-210ENST00000553693 PCBP2Q15366 365 aaKnown RBP eCLIP5.27□□□□□ -1.571e-6■■■□□ 18.2
SCFD1-210ENST00000553693 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 NBPF8Q3BBV2 869 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 VWA1Q6PCB0 445 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 PDLIM2Q96JY6 352 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 LRFN3Q9BTN0 628 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 IMPG2Q9BZV3 1241 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 CCDC8Q9H0W5 538 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-210ENST00000553693 SIDT1Q9NXL6 827 aaKnown RBP5.27□□□□□ -1.57
SCFD1-210ENST00000553693 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 CADPSQ9ULU8 1353 aa5.27□□□□□ -1.57
SCFD1-210ENST00000553693 TOR1BO14657 336 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 MPPED1O15442 326 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 PROM1O43490 865 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 ARIH2O95376 493 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 GNAI3P08754 354 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 CCND1P24385 295 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 GNAI1P63096 354 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 POU6F2P78424 691 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-210ENST00000553693 AMPD3Q01432 767 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 FPGSQ05932 587 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 GRASPQ7Z6J2 395 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-210ENST00000553693 MIER2Q8N344 545 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 FAM98AQ8NCA5 519 aaKnown RBP5.26□□□□□ -1.57
SCFD1-210ENST00000553693 TMIEQ8NEW7 156 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
SCFD1-210ENST00000553693 SNX19Q92543 992 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 FBXL20Q96IG2 436 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 RLIMQ9NVW2 624 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 CTTNBP2NLQ9P2B4 639 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 PCDHB1Q9Y5F3 818 aa5.26□□□□□ -1.57
SCFD1-210ENST00000553693 E7ENX8 843 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 CYP2C19P33261 490 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 PTH2RP49190 550 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 TAP2Q03519 686 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 DYRK1AQ13627 763 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 HLXQ14774 488 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-210ENST00000553693 FLYWCH1Q4VC44 716 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 THEMIS2Q5TEJ8 643 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 KIAA0895LQ68EN5 471 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 TAPT1Q6NXT6 567 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SLC4A10Q6U841 1118 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 MICALCLQ6ZW33 695 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 PDSS2Q86YH6 399 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 CFAP52Q8N1V2 620 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 PDPRQ8NCN5 879 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 ZCRB1Q8TBF4 217 aaKnown RBP5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SCAMP4Q969E2 229 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 PGBD1Q96JS3 809 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SMOQ99835 787 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SEMA4GQ9NTN9 838 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 CFAP97Q9P2B7 532 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms