RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 NSUN7Q8NE18 718 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 CNDP2Q96KP4 475 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 BPIFA3Q9BQP9 254 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 NOSIPQ9Y314 301 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 L3MBTL1Q9Y468 752 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 STXBP3O00186 592 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 ANP32DO95626 131 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TARSP26639 723 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 MCL1Q07820 350 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 PCBP1Q15365 356 aaKnown RBP eCLIP4.29□□□□□ -1.72
RDH11-204ENST00000553578 TAF11Q15544 211 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 NDUFAF2Q8N183 169 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TEX9Q8N6V9 391 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 C1orf127Q8N9H9 656 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 DEPTORQ8TB45 409 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 KLHDC4Q8TBB5 520 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 C7orf43Q8WVR3 580 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SCARF2Q96GP6 870 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 NSRP1Q9H0G5 558 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 KAT14Q9H8E8 782 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SP110Q9HB58 689 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 DISC1Q9NRI5 854 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 PCMTD2Q9NV79 361 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 ATAD3AQ9NVI7 634 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 FAM184BQ9ULE4 1060 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TMCO1Q9UM00 188 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 MINPP1Q9UNW1 487 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 C15orf41Q9Y2V0 281 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 COQ6Q9Y2Z9 468 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 ATP6V1DQ9Y5K8 247 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 PHIPQ8WWQ0 1821 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 BAZ2AQ9UIF9 1905 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 TRBV23-1A0A0A0MS06 115 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 A0A1W2PQ27 194 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 A0A1W2PQ64 194 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 A0A1W2PQD8 194 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 TBKBP1A7MCY6 615 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SPECC1L-ADORA2AF8WAN1 911 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SNAP23O00161 211 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SH2B2O14492 632 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 C2CD2LO14523 706 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 HNRNPRO43390 633 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 STX6O43752 255 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 CLASP2O75122 1294 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 LARGE1O95461 756 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 PDHA1P08559 390 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 RBP3P10745 1247 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 GBP1P32455 592 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 HPDP32754 393 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 TCF7P36402 384 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 FNTAP49354 379 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 GNAQP50148 359 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 UBE2HP62256 183 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 RALGDSQ12967 914 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 ITGB3BPQ13352 177 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 RASA2Q15283 850 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 PPP1R7Q15435 360 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 CNGA3Q16281 694 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 WIPI1Q5MNZ9 446 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 RASIP1Q5U651 963 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 OLFML2BQ68BL8 750 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 FAM196AQ6ZSG2 479 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 DGKHQ86XP1 1220 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 LRRC49Q8IUZ0 686 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 MAP7D3Q8IWC1 876 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 FAM9CQ8IZT9 166 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 WDR60Q8WVS4 1066 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.29□□□□□ -1.72
RDH11-204ENST00000553578 NLRC4Q9NPP4 1024 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 EIF2B3Q9NR50 452 aaKnown RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 AKAP7Q9P0M2 348 aaPredicted RBP4.29□□□□□ -1.72
RDH11-204ENST00000553578 SIK3Q9Y2K2 1263 aa4.29□□□□□ -1.72
RDH11-204ENST00000553578 SLX4Q8IY92 1834 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 HTR3EA5X5Y0 456 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 GSG1L2A8MUP6 293 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 AP3B1O00203 1094 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 BAIAP3O94812 1187 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 APOEP02649 317 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 POLBP06746 335 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 RHOXF2BP0C7M4 288 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 FDPSP14324 419 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 NFKB1P19838 968 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PDIA3P30101 505 aaKnown RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 NPTX2P47972 431 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 IRAK1P51617 712 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 USP11P51784 963 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CDK17Q00537 523 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 CASP8Q14790 479 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 PCSK7Q16549 785 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 HIBCHQ6NVY1 386 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 TXNDC11Q6PKC3 985 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
RDH11-204ENST00000553578 APPL2Q8NEU8 664 aa4.28□□□□□ -1.72
RDH11-204ENST00000553578 ENGASEQ8NFI3 743 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms