RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 M0QZQ0 153 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SPATA31D3P0C874 917 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 BFSP1Q12934 665 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SMAD4Q13485 552 aaKnown RBP24.62■■□□□ 1.53
TDP1-206ENST00000553569 STIM1Q13586 685 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 MYBPC2Q14324 1141 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 NFIL3Q16649 462 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 DUOXA2Q1HG44 320 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SCARA3Q6AZY7 606 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SPATA31D4Q6ZUB0 917 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 ADSSL1Q8N142 457 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 PLEKHO2Q8TD55 490 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 TMEM174Q8WUU8 243 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SENP8Q96LD8 212 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 TSG101Q99816 390 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 MAN1C1Q9NR34 630 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 DZANK1Q9NVP4 752 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 SIX4Q9UIU6 781 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 CDY1Q9Y6F8 540 aa24.62■■□□□ 1.53
TDP1-206ENST00000553569 TGM5O43548 720 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 ODC1P11926 461 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 RPL13P26373 211 aaKnown RBP24.61■■□□□ 1.53
TDP1-206ENST00000553569 OR1D2P34982 312 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 MORC3Q14149 939 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 SV2CQ496J9 727 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 ZNF280DQ6N043 979 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 SYCE2Q6PIF2 218 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 RSPO2Q6UXX9 243 aaPredicted RBP24.61■■□□□ 1.53
TDP1-206ENST00000553569 C12orf76Q8N812 135 aaPredicted RBP24.61■■□□□ 1.53
TDP1-206ENST00000553569 SMRP1Q8NCR6 262 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 GZF1Q9H116 711 aaPredicted RBP24.61■■□□□ 1.53
TDP1-206ENST00000553569 R3HCC1Q9Y3T6 440 aaKnown RBP24.61■■□□□ 1.53
TDP1-206ENST00000553569 BACE2Q9Y5Z0 518 aa24.61■■□□□ 1.53
TDP1-206ENST00000553569 UNC80Q8N2C7 3258 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 TRIM49BA6NDI0 452 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 GRXCR2A6NFK2 248 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 H7C4K7 107 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 MBTPS2O43462 519 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 IL9P15248 144 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 CD44P16070 742 aaKnown RBP24.6■■□□□ 1.53
TDP1-206ENST00000553569 BMP6P22004 513 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 PNPLA4P41247 253 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 ARPP19P56211 112 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 RBP5P82980 135 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 YWHAHQ04917 246 aaPredicted RBP24.6■■□□□ 1.53
TDP1-206ENST00000553569 ADAM9Q13443 819 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 EDRF1Q3B7T1 1238 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 PUS10Q3MIT2 529 aaKnown RBP24.6■■□□□ 1.53
TDP1-206ENST00000553569 CTXN3Q4LDR2 81 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 RARS2Q5T160 578 aaKnown RBP24.6■■□□□ 1.53
TDP1-206ENST00000553569 KLHL10Q6JEL2 608 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 USP37Q86T82 979 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 CXorf38Q8TB03 319 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 EEF2KMTQ96G04 330 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 NUP62CLQ9H1M0 184 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 KIAA1468Q9P260 1216 aa24.6■■□□□ 1.53
TDP1-206ENST00000553569 XIRP2A4UGR9 3374 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 SPTBN5Q9NRC6 3674 aaKnown RBP24.59■■□□□ 1.53
TDP1-206ENST00000553569 LRRIQ3A6PVS8 624 aaPredicted RBP24.59■■□□□ 1.53
TDP1-206ENST00000553569 CYB561D2O14569 222 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 PSMA7O14818 248 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 AKAP3O75969 853 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 HOXB8P17481 243 aaPredicted RBP24.59■■□□□ 1.53
TDP1-206ENST00000553569 PAX3P23760 479 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 PMS1P54277 932 aaKnown RBP24.59■■□□□ 1.53
TDP1-206ENST00000553569 CENPPQ6IPU0 288 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 TRAPPC11Q7Z392 1133 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 FAM186BQ8IYM0 893 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 LRRC52Q8N7C0 313 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 PARD3BQ8TEW8 1205 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 FBXL5Q9UKA1 691 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 CTNND2Q9UQB3 1225 aa24.59■■□□□ 1.53
TDP1-206ENST00000553569 MTCL1Q9Y4B5 1905 aaKnown RBP24.59■■□□□ 1.53
TDP1-206ENST00000553569 KPNA7A9QM74 516 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 BMP1P13497 986 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 TYMPP19971 482 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 MRPL58Q14197 206 aaKnown RBP24.58■■□□□ 1.53
TDP1-206ENST00000553569 ANKRD40Q6AI12 368 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 OVOS1Q6IE37 1185 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 ELMSAN1Q6PJG2 1045 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 ZNF516Q92618 1163 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 SFXN1Q9H9B4 322 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 CDH22Q9UJ99 828 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 FAM50BQ9Y247 325 aa24.58■■□□□ 1.53
TDP1-206ENST00000553569 USP15Q9Y4E8 981 aaPredicted RBP24.58■■□□□ 1.53
TDP1-206ENST00000553569 ARHGEF37A1IGU5 675 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 CCNE1P24864 410 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 PSMC2P35998 433 aaKnown RBP24.57■■□□□ 1.52
TDP1-206ENST00000553569 PPP1R2P41236 205 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 DLG4P78352 724 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 ROR1Q01973 937 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 RAB33AQ14088 237 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 LILRA6Q6PI73 481 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 TMC5Q6UXY8 1006 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 TRIML1Q8N9V2 468 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 KREMEN2Q8NCW0 462 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 GPT2Q8TD30 523 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 BORCS6Q96GS4 357 aa24.57■■□□□ 1.52
TDP1-206ENST00000553569 DHTKD1Q96HY7 919 aaPredicted RBP24.57■■□□□ 1.52
TDP1-206ENST00000553569 S1PR5Q9H228 398 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms